RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
ACTB-204ENST00000425660 A0A0B4J269 797 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 EDN1P05305 212 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 CYP2B6P20813 491 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 CYP2C19P33261 490 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 APLP1P51693 650 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 CLDN10P78369 228 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 KRT83P78385 493 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 CYP24A1Q07973 514 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 CETN1Q12798 172 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 Q9Y3F1 56 aa16.53■□□□□ 0.24
ACTB-204ENST00000425660 R3HCC1Q9Y3T6 440 aaKnown RBP16.53■□□□□ 0.24
ACTB-204ENST00000425660 SERPING1P05155 500 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 PLEKP08567 350 aaPredicted RBP16.52■□□□□ 0.24
ACTB-204ENST00000425660 RFX1P22670 979 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 KLRC1P26715 233 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 GTF2H1P32780 548 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 TFDP1Q14186 410 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 RHPN2Q8IUC4 686 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 KIF18AQ8NI77 898 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
ACTB-204ENST00000425660 HAPLN2Q9GZV7 340 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.24
ACTB-204ENST00000425660 ZNF233A6NK53 670 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 F2P00734 622 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 CLCN3P51790 818 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 MAPK6Q16659 721 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 TLK2Q86UE8 772 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 IFNLR1Q8IU57 520 aaPredicted RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 EHBP1Q8NDI1 1231 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 MRPL4Q9BYD3 311 aaKnown RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 TMEM117Q9H0C3 514 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 INTS2Q9H0H0 1204 aaKnown RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 FZD8Q9H461 694 aa16.52■□□□□ 0.23
ACTB-204ENST00000425660 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.23
ACTB-204ENST00000425660 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 A0A0U1RQJ8 604 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 DYNC1LI2O43237 492 aaPredicted RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 TOM1L1O75674 476 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 IPO7O95373 1038 aaKnown RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 SRGAP2CP0DJJ0 459 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 EIF4A3P38919 411 aaKnown RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 PRKCIP41743 596 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 ARHGAP25P42331 645 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 GCLMP48507 274 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 MXI1P50539 228 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 KIF11P52732 1056 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 FCGRTP55899 365 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 PTENP60484 403 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 CRELD2Q6UXH1 353 aaPredicted RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 METTL13Q8N6R0 699 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 SPAG5Q96R06 1193 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 BZW2Q9Y6E2 419 aaKnown RBP16.51■□□□□ 0.23
ACTB-204ENST00000425660 CENPFP49454 3210 aa16.51■□□□□ 0.23
ACTB-204ENST00000425660 ZNF263O14978 683 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 FANCGO15287 622 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 RAPGEF1Q13905 1077 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 PSMD6Q15008 389 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 MARCH8Q5T0T0 291 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 KRT39Q6A163 491 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 SYT10Q6XYQ8 523 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 ZBTB10Q96DT7 871 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 STK33Q9BYT3 514 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 IFT122Q9HBG6 1241 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
ACTB-204ENST00000425660 TTLL13PA6NNM8 815 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ACKR2O00590 384 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ABLIM1O14639 778 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 CLDN3O15551 220 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 FAM189A1O60320 539 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 AOC2O75106 756 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PRKCBP05771 671 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 GJB1P08034 283 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 TMOD1P28289 359 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
ACTB-204ENST00000425660 IGBP1P78318 339 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PPFIA1Q13136 1202 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 GRIK4Q16099 956 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ARHGAP29Q52LW3 1261 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PHLDB3Q6NSJ2 640 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms