RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 HES6Q96HZ4 224 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 CEP89Q96ST8 783 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 INTS2Q9H0H0 1204 aaKnown RBP14□□□□□ -0.17
COL12A1-205ENST00000425443 WNT10BO00744 389 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 FAM107AO95990 144 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 MYZAPP0CAP1 466 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 C6orf89Q6UWU4 347 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 B4GALNT4Q76KP1 1039 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 IL31RAQ8NI17 732 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 SLC35G2Q8TBE7 412 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 NEK9Q8TD19 979 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 STK33Q9BYT3 514 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 ACP6Q9NPH0 428 aa14□□□□□ -0.17
COL12A1-205ENST00000425443 NOVA2Q9UNW9 492 aaKnown RBP14□□□□□ -0.17
COL12A1-205ENST00000425443 TMEM150BA6NC51 233 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 PLA2G6O60733 806 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 SHBGP04278 402 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 LMNB1P20700 586 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 BFSP1Q12934 665 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 SYCE1Q8N0S2 351 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 AGBL3Q8NEM8 1001 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 MDM1Q8TC05 714 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 PPP1R1BQ9UD71 204 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 DDX20Q9UHI6 824 aaKnown RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 COG5Q9UP83 839 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ZHX2Q9Y6X8 837 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 UBE4BO95155 1302 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 F8VZ95 297 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 FAM163BP0C2L3 166 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 CXCL9Q07325 125 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 DGKZQ13574 1117 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 CUL1Q13616 776 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 FKBP1CQ5VVH2 108 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 LRIG3Q6UXM1 1119 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 C1orf131Q8NDD1 294 aaKnown RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 GLG1Q92896 1179 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 EPB41L4BQ9H329 900 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 EME2A4GXA9 379 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ATP2C2O75185 946 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 FSBPO95073 299 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 BCRP11274 1271 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ZNF131P52739 623 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 THAP2Q9H0W7 228 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-205ENST00000425443 APEX2Q9UBZ4 518 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
COL12A1-205ENST00000425443 ANXA13P27216 316 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 PTGER2P43116 358 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 MAGOHP61326 146 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 DLG4P78352 724 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 DHX9Q08211 1270 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 TKFCQ3LXA3 575 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 CIAPIN1Q6FI81 312 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 MAGOHBQ96A72 148 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 ACCSQ96QU6 501 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 MAF1Q9H063 256 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 UBE2TQ9NPD8 197 aaPredicted RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 AMFRQ9UKV5 643 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 TLDC2A0PJX2 215 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 CCDC169A6NNP5 214 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 WDR46O15213 610 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 HSD17B4P51659 736 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 SF3B2Q13435 895 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 FAM102BQ5T8I3 360 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 FMNL3Q8IVF7 1028 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 ZSWIM2Q8NEG5 633 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 SLC20A1Q8WUM9 679 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 RAPGEF5Q92565 580 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 FIZ1Q96SL8 496 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
COL12A1-205ENST00000425443 ATXN2Q99700 1313 aaKnown RBP13.98□□□□□ -0.17
COL12A1-205ENST00000425443 TRAPPC3O43617 180 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 GCLMP48507 274 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 PEX3P56589 373 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 XKR9Q5GH70 373 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 CCDC13Q8IYE1 715 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 SEC14L1Q92503 715 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 ALG3Q92685 438 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TATDN2Q93075 761 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 FAM84AQ96KN4 292 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 JPH2Q9BR39 696 aaPredicted RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 MYH11P35749 1972 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 DNM1LO00429 736 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 ZBED4O75132 1171 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms