RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TPM2P07951 284 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 LCP1P13796 627 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 GLULP15104 373 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ELF1P32519 619 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ID4P47928 161 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 IL2P60568 153 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 OCRLQ01968 901 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SMAD4Q13485 552 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 BLMHQ13867 455 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF460Q14592 562 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 PCBP2Q15366 365 aaKnown RBP eCLIP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 CCNG2Q16589 344 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SPATS1Q496A3 300 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RILPL1Q5EBL4 403 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RRP12Q5JTH9 1297 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SLC10A5Q5PT55 438 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 MROH9Q5TGP6 573 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 DENND5AQ6IQ26 1287 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 CPLX2Q6PUV4 134 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 B3GNT9Q6UX72 402 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 DSTYKQ6XUX3 929 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 GPR155Q7Z3F1 870 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 DAAM2Q86T65 1068 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ZC3H18Q86VM9 953 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 NLRP10Q86W26 655 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 MIB1Q86YT6 1006 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RIOX2Q8IUF8 465 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 Q8N1Y9 231 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 TEX9Q8N6V9 391 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 LINC00482Q8N8I6 264 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 GSTCDQ8NEC7 633 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 DIO2Q92813 273 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 TBC1D31Q96DN5 1066 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 LTV1Q96GA3 475 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 AHCYL2Q96HN2 611 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 FAXDC2Q96IV6 333 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RSRC1Q96IZ7 334 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ZMAT2Q96NC0 199 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SPAG5Q96R06 1193 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RMDN3Q96TC7 470 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 GORASP1Q9BQQ3 440 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 CENPOQ9BU64 300 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 XPO4Q9C0E2 1151 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SLC12A5Q9H2X9 1139 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ANKEF1Q9NU02 776 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 ARGLU1Q9NWB6 273 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SPATA6Q9NWH7 488 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 NSMCE4AQ9NXX6 385 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 MAFFQ9ULX9 164 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 CRYL1Q9Y2S2 319 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 TIMM13Q9Y5L4 95 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 BLACEA4D250 179 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 TRIM64CA6NLI5 447 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 M0R2C6 588 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CPLX1O14810 134 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 AREL1O15033 823 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 NOBOXO60393 691 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 SCG5P05408 212 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ADRB1P08588 477 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 HOXC12P31275 282 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 KIF5BP33176 963 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 GALNSP34059 522 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CNR2P34972 360 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 THBS2P35442 1172 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 PPP2R2AP63151 447 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ICA1Q05084 483 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 EFEMP1Q12805 493 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 PLCB4Q15147 1175 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CC2D1BQ5T0F9 858 aaKnown RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 YOD1Q5VVQ6 348 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CDCA2Q69YH5 1023 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 TMCO3Q6UWJ1 677 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC149Q6ZUS6 474 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 DPP9Q86TI2 863 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF761Q86XN6 746 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CCDC103Q8IW40 242 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 FAM126BQ8IXS8 530 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 PPIL6Q8IXY8 311 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ZNF713Q8N859 430 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 ARL10Q8N8L6 244 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 TMEM145Q8NBT3 493 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 APPL2Q8NEU8 664 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 SLC7A14Q8TBB6 771 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 BORCS6Q96GS4 357 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 UBXN10Q96LJ8 280 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 IWS1Q96ST2 819 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 FAM167BQ9BTA0 163 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 C11orf84Q9BUA3 381 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-205ENST00000424674 VPS11Q9H270 941 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 DBNDD1Q9H9R9 158 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 SLC52A2Q9HAB3 445 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 PLEKHA5Q9HAU0 1116 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 MKS1Q9NXB0 559 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 FNIP2Q9P278 1114 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 EPS15L1Q9UBC2 864 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 SEL1LQ9UBV2 794 aa4.26□□□□□ -1.73
SF3B1-205ENST00000424674 CNOT11Q9UKZ1 510 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms