RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ATF7IP2Q5U623 682 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 STXBP4Q6ZWJ1 553 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 RSPH3Q86UC2 560 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 ELMO3Q96BJ8 720 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.06
PRPF39-202ENST00000424478 ST6GALNAC4Q9H4F1 302 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 HSPBP1Q9NZL4 362 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 ST3GAL5Q9UNP4 418 aa14.71□□□□□ -0.06
PRPF39-202ENST00000424478 RPS6KA5O75582 802 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 CRYBB1P53674 252 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-202ENST00000424478 LPIN1Q14693 890 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 LMBRD2Q68DH5 695 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-202ENST00000424478 TSG101Q99816 390 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 HIPK3Q9H422 1215 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRPF39-202ENST00000424478 TAB2Q9NYJ8 693 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 ACKR2O00590 384 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 PDXKO00764 312 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 EFNA5P52803 228 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 GPNMBQ14956 572 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 TCTN1Q2MV58 587 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 ZNF410Q86VK4 478 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 CCDC155Q8N6L0 562 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 MRPL4Q9BYD3 311 aaKnown RBP14.7□□□□□ -0.06
PRPF39-202ENST00000424478 WNT8AQ9H1J5 351 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 C2orf40Q9H1Z8 148 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 GRPEL1Q9HAV7 217 aa14.7□□□□□ -0.06
PRPF39-202ENST00000424478 MEIS3P2A8K0S8 358 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 PES1O00541 588 aaKnown RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 EXOC3O60645 756 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 ADRB2P07550 413 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 CNOT6LQ96LI5 555 aaKnown RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 POP1Q99575 1024 aaKnown RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 VPS16Q9H269 839 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 PDZD7Q9H5P4 517 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TMEM134Q9H6X4 195 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TMEM206Q9H813 350 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TMEM39AQ9NV64 488 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 PADI3Q9ULW8 664 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 ALPK3Q96L96 1907 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 MGEA5O60502 916 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 SYN1P17600 705 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 COBLL1Q53SF7 1204 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 FBXO47Q5MNV8 452 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 SCARA3Q6AZY7 606 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 CCDC127Q96BQ5 260 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 MSTO1Q9BUK6 570 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TRAF3IP3Q9Y228 551 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 FSD2A1L4K1 749 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TRIM43BA6NCK2 446 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 CLDN3O15551 220 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 CALUO43852 315 aaPredicted RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 NBNO60934 754 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 NPTXRO95502 500 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TRIM49P0CI25 452 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TRIM49CP0CI26 452 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 DLG4P78352 724 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 PTPN11Q06124 597 aaPredicted RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 LRRC8DQ7L1W4 858 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 TRIM43Q96BQ3 446 aaPredicted RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 BPIFA3Q9BQP9 254 aa14.69□□□□□ -0.06
PRPF39-202ENST00000424478 NOC4LQ9BVI4 516 aaKnown RBP14.69□□□□□ -0.06
PRPF39-202ENST00000424478 KCNJ18B7U540 433 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 ABLIM1O14639 778 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 LRRC63Q05C16 580 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 KCNJ12Q14500 433 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 NME8Q8N427 588 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 RNF169Q8NCN4 708 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 CDT1Q9H211 546 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 TOPORSQ9NS56 1045 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 PRMT7Q9NVM4 692 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 FKBP3Q00688 224 aaKnown RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 CCDC40Q4G0X9 1142 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 DCAF17Q5H9S7 520 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 SRGAP1Q7Z6B7 1085 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 ANKLE1Q8NAG6 615 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 PLEKHO2Q8TD55 490 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 NAP1L5Q96NT1 182 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 RNF39Q9H2S5 420 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 TMX1Q9H3N1 280 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 NXF3Q9H4D5 531 aaKnown RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 AGO2Q9UKV8 859 aaKnown RBP14.68□□□□□ -0.06
PRPF39-202ENST00000424478 EXOC7Q9UPT5 735 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 TRIP11Q15643 1979 aa14.68□□□□□ -0.06
PRPF39-202ENST00000424478 IKBKBO14920 756 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 KIF20AO95235 890 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 AKAP5P24588 427 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 CNTNAP2Q9UHC6 1331 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 ZNF18P17022 549 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 ALCAMQ13740 583 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 CDKAL1Q5VV42 579 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 TCERG1LQ5VWI1 586 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms