RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GBP1P32455 592 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 SLC26A2P50443 739 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CLCN3P51790 818 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 KPNA1P52294 538 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ACTR2P61160 394 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CREMQ03060 361 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 FZD5Q13467 585 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PABPC1LQ4VXU2 614 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF484Q5JVG2 852 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ZMYM1Q5SVZ6 1142 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 WDR5BQ86VZ2 330 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF280BQ86YH2 543 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 TRMT2AQ8IZ69 625 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ITFG1Q8TB96 612 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CSGALNACT1Q8TDX6 532 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PIK3R5Q8WYR1 880 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 IRF7Q92985 503 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PGBD4Q96DM1 585 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 UBL7Q96S82 380 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 ZSCAN10Q96SZ4 725 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PCYT2Q99447 389 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 UBAC1Q9BSL1 405 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 HERC2P3Q9BVR0 1158 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 TRMT61BQ9BVS5 477 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 RBM12Q9NTZ6 932 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PIN4Q9Y237 131 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 MRPS23Q9Y3D9 190 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 RAI2Q9Y5P3 530 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 STK24Q9Y6E0 443 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 MYH15Q9Y2K3 1946 aa7.18□□□□□ -1.26
SDCBP-203ENST00000424270 CNOT1A5YKK6 2376 aaKnown RBP7.18□□□□□ -1.26
SDCBP-203ENST00000424270 PALM3A6NDB9 673 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 H0Y626 953 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 NRP1O14786 923 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 LILRB3O75022 631 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 GPR32O75388 356 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 RHOBTB1O94844 696 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 TRIM16O95361 564 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 C8AP07357 584 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 PCP11498 1178 aaKnown RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 RPL17P18621 184 aaKnown RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 GDI1P31150 447 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 MAPK8P45983 427 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 PHKA2P46019 1235 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 IFIT1BQ5T764 474 aaKnown RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 TAS1R1Q7RTX1 841 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 NPAS3Q8IXF0 933 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 YAF2Q8IY57 180 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 CHCHD4Q8N4Q1 142 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 B3GALT6Q96L58 329 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 ARID3AQ99856 593 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 TMEM175Q9BSA9 504 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 APOL6Q9BWW8 343 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 PLA2G2FQ9BZM2 168 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF302Q9NR11 478 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 SLC8A2Q9UPR5 921 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 COL1A2P08123 1366 aa7.17□□□□□ -1.26
SDCBP-203ENST00000424270 DSPP15924 2871 aaKnown RBP7.17□□□□□ -1.26
SDCBP-203ENST00000424270 PNMA6FA0A0J9YX94 578 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 LNP1A1A4G5 178 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 K7ESF4 209 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 CAPN9O14815 690 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF263O14978 683 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 CSDE1O75534 798 aaKnown RBP7.16□□□□□ -1.26
SDCBP-203ENST00000424270 FGAP02671 866 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 HNRNPA1P09651 372 aaKnown RBP eCLIP7.16□□□□□ -1.26
SDCBP-203ENST00000424270 FGRP09769 529 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 RLBP1P12271 317 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 ITGB5P18084 799 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 SFPQP23246 707 aaKnown RBP eCLIP7.16□□□□□ -1.26
SDCBP-203ENST00000424270 RAP1GAPP47736 663 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 RAB27AP51159 221 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 PLCB2Q00722 1185 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 EFCAB12Q6NXP0 572 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 MIS18BP1Q6P0N0 1132 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 Q6ZS52 159 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 LRRC71Q8N4P6 559 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 SPRYD3Q8NCJ5 442 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 GCOM2Q9BZD3 368 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-203ENST00000424270 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 ZFP14Q9HCL3 533 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 CEP131Q9UPN4 1083 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 MYH6P13533 1939 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 NEDD4P46934 1319 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 FRMPD4Q14CM0 1322 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 ITPR1Q14643 2758 aa7.16□□□□□ -1.26
SDCBP-203ENST00000424270 ZNF213O14771 459 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 MAGEB2O15479 319 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 MAFGO15525 162 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms