RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 TLE6Q9H808 572 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
SPC24-201ENST00000423327 VWA3AA6NCI4 1184 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 ARL5CA6NH57 179 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 SCNN1GP51170 649 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 RNASELQ05823 741 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 SMAD4Q13485 552 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 SMAD2Q15796 467 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 PUS10Q3MIT2 529 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 KRT79Q5XKE5 535 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 PDE12Q6L8Q7 609 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 SLC27A1Q6PCB7 646 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 CNNM3Q8NE01 707 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 GAD1Q99259 594 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 APOL6Q9BWW8 343 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 MARCH5Q9NX47 278 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
SPC24-201ENST00000423327 CD207Q9UJ71 328 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
SPC24-201ENST00000423327 C2orf71A6NGG8 1288 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 F8W810 466 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 PRKCBP05771 671 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 AKAP5P24588 427 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 KRT17Q04695 432 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 ZP2Q05996 745 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 DSC1Q08554 894 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 COASYQ13057 564 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 EEF1DP3Q658K8 133 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
SPC24-201ENST00000423327 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 C1orf186Q6ZWK4 172 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 TMC7Q7Z402 723 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 COLGALT2Q8IYK4 626 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 CDCA3Q99618 268 aaPredicted RBP17.1■□□□□ 0.33
SPC24-201ENST00000423327 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
SPC24-201ENST00000423327 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
SPC24-201ENST00000423327 NRP1O14786 923 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 HIP1RO75146 1068 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
SPC24-201ENST00000423327 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
SPC24-201ENST00000423327 VPS52Q8N1B4 723 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 MRPL43Q8N983 215 aaKnown RBP17.09■□□□□ 0.33
SPC24-201ENST00000423327 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 PLIN2Q99541 437 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 DNM3Q9UQ16 869 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 GIT1Q9Y2X7 761 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 MYH11P35749 1972 aa17.09■□□□□ 0.33
SPC24-201ENST00000423327 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 ACKR2O00590 384 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 EFEMP2O95967 443 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 CTSAP10619 480 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 LIG1P18858 919 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 RESTQ13127 1097 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 MAPK6Q16659 721 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 TMEM184AQ6ZMB5 413 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 GJD3Q8N144 294 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
SPC24-201ENST00000423327 EPHX3Q9H6B9 360 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 UBN1Q9NPG3 1134 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 KLK14Q9P0G3 267 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 KANSL3Q9P2N6 904 aa17.08■□□□□ 0.32
SPC24-201ENST00000423327 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 SYT1P21579 422 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 NPTX2P47972 431 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 PRPF4BQ13523 1007 aaKnown RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 PTPAQ15257 358 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 ZRSR1Q15695 479 aaKnown RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 SYCE2Q6PIF2 218 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 ADHFE1Q8IWW8 467 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 RNF168Q8IYW5 571 aaPredicted RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 FEZF2Q8TBJ5 459 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms