RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
SQSTM1-203ENST00000422245 FAN1Q9Y2M0 1017 aa12.83□□□□□ -0.36
SQSTM1-203ENST00000422245 DDHD2O94830 711 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 POMCP01189 267 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 ALDH2P05091 517 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 URODP06132 367 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 SPATA31C1P0DKV0 1188 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 EPCAMP16422 314 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 MLH1P40692 756 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 DSC1Q08554 894 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 RARS2Q5T160 578 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 ZBTB33Q86T24 672 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 CABP7Q86V35 215 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 SUGP1Q8IWZ8 645 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 PIGOQ8TEQ8 1089 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 SLC22A17Q8WUG5 538 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 SFXN1Q9H9B4 322 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 MRPL17Q9NRX2 175 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 DBR1Q9UK59 544 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 GIT1Q9Y2X7 761 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 ZDBF2Q9HCK1 2354 aa12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-203ENST00000422245 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 LRRIQ4A6NIV6 560 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 NRP1O14786 923 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 NR1I2O75469 434 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SEC24BO95487 1268 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SOD2P04179 222 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SCNN1GP51170 649 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 ATAT1Q5SQI0 421 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 HAUS3Q68CZ6 603 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 CDCA2Q69YH5 1023 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SLC27A1Q6PCB7 646 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 COLGALT2Q8IYK4 626 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 TDRD5Q8NAT2 981 aaKnown RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 PBXIP1Q96AQ6 731 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 FBXL18Q96ME1 805 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 NACC1Q96RE7 527 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 GAD1Q99259 594 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 CDH22Q9UJ99 828 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 PRG3Q9Y2Y8 225 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 HES2Q9Y543 173 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 TRIOO75962 3097 aa12.81□□□□□ -0.36
SQSTM1-203ENST00000422245 DENND4AQ7Z401 1863 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 C2CD4DB7Z1M9 353 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 B4GALT5O43286 388 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 MED24O75448 989 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 SSBP05455 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 MUTP22033 750 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 KLRC2P26717 231 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 RPA1P27694 616 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 OR1G1P47890 313 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 CLCN4P51793 760 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 GRIK3Q13003 919 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 MTMR3Q13615 1198 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 ELMSAN1Q6PJG2 1045 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 FBXL6Q8N531 539 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 ZFP42Q96MM3 310 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 KLHL5Q96PQ7 755 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 PRRX2Q99811 253 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 APOL6Q9BWW8 343 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 GPRC5CQ9NQ84 441 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 NOL7Q9UMY1 257 aaKnown RBP12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
SQSTM1-203ENST00000422245 KMT2EQ8IZD2 1858 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms