RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CLIC6Q96NY7 704 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 PDZD7Q9H5P4 517 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 PHLPP2Q6ZVD8 1323 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 VCANP13611 3396 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 ZC3H11AO75152 810 aaKnown RBP eCLIP29.1■■■□□ 2.25
CDK9-202ENST00000421939 F13A1P00488 732 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 EDN1P05305 212 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 TXLNAP40222 546 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 PLCB3Q01970 1234 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 GPBP1Q86WP2 473 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 RAD54LQ92698 747 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 APOL6Q9BWW8 343 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 RNF39Q9H2S5 420 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 KMT5AQ9NQR1 393 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 SPG21Q9NZD8 308 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 ARHGAP28Q9P2N2 729 aa29.1■■■□□ 2.25
CDK9-202ENST00000421939 AFF1P51825 1210 aaKnown RBP29.09■■■□□ 2.25
CDK9-202ENST00000421939 BCAR1P56945 870 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 MRPS5P82675 430 aaKnown RBP29.09■■■□□ 2.25
CDK9-202ENST00000421939 PKP1Q13835 747 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 ARSHQ5FYA8 562 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 SLC39A11Q8N1S5 342 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 LINC00301Q8NCQ3 95 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 NRDE2Q9H7Z3 1164 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 KANSL3Q9P2N6 904 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 LZTS1Q9Y250 596 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 USP20Q9Y2K6 914 aa29.09■■■□□ 2.25
CDK9-202ENST00000421939 NPHP3-ACAD11A0A0J9YXS1 232 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 CARNS1A5YM72 827 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 SFI1A8K8P3 1242 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 K7ERI5 159 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 INPPL1O15357 1258 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 PLS3P13797 630 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 IRS1P35568 1242 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 MLH1P40692 756 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 ALDH7A1P49419 539 aaKnown RBP29.08■■■□□ 2.25
CDK9-202ENST00000421939 TFF2Q03403 129 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 DHX8Q14562 1220 aaKnown RBP29.08■■■□□ 2.25
CDK9-202ENST00000421939 MCM6Q14566 821 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 SPIRE2Q8WWL2 714 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 MRPS27Q92552 414 aaKnown RBP29.08■■■□□ 2.25
CDK9-202ENST00000421939 LARP4BQ92615 738 aaKnown RBP29.08■■■□□ 2.25
CDK9-202ENST00000421939 ADPGKQ9BRR6 497 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 GBP3Q9H0R5 595 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 TLR9Q9NR96 1032 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 CCDC39Q9UFE4 941 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 GIT1Q9Y2X7 761 aa29.08■■■□□ 2.25
CDK9-202ENST00000421939 RBM19Q9Y4C8 960 aaKnown RBP29.08■■■□□ 2.25
CDK9-202ENST00000421939 AAK1Q2M2I8 961 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 TJAP1Q5JTD0 557 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 PPP2R3CQ969Q6 453 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 ASB2Q96Q27 587 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 GAD1Q99259 594 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 TMEM134Q9H6X4 195 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 UBE2ZQ9H832 354 aaPredicted RBP29.07■■■□□ 2.24
CDK9-202ENST00000421939 TFIP11Q9UBB9 837 aaKnown RBP29.07■■■□□ 2.24
CDK9-202ENST00000421939 ZMYM2Q9UBW7 1377 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 PUF60Q9UHX1 559 aaKnown RBP29.07■■■□□ 2.24
CDK9-202ENST00000421939 ODF2LQ9ULJ1 636 aa29.07■■■□□ 2.24
CDK9-202ENST00000421939 MYH11P35749 1972 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 ARL5CA6NH57 179 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 SPTLC2O15270 562 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 SLC16A4O15374 487 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 B4GALT3O60512 393 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 YEATS4O95619 227 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 CACNB1Q02641 598 aaPredicted RBP29.06■■■□□ 2.24
CDK9-202ENST00000421939 NT5DC1Q5TFE4 455 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 EEF1DP3Q658K8 133 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 ZNF280BQ86YH2 543 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 REEP2Q9BRK0 252 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 NTPCRQ9BSD7 190 aaKnown RBP29.06■■■□□ 2.24
CDK9-202ENST00000421939 STK17AQ9UEE5 414 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 KCNG1Q9UIX4 513 aa29.06■■■□□ 2.24
CDK9-202ENST00000421939 NT5C1B-RDH14C9J2C7 533 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 POMCP01189 267 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 AKAP5P24588 427 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 KRT17Q04695 432 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 COL19A1Q14993 1142 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 DCAF4L1Q3SXM0 396 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 FOXD4L6Q3SYB3 417 aaPredicted RBP29.05■■■□□ 2.24
CDK9-202ENST00000421939 ATF7IP2Q5U623 682 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 FOXD4L3Q6VB84 417 aaPredicted RBP29.05■■■□□ 2.24
CDK9-202ENST00000421939 TAS1R3Q7RTX0 852 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 ZFP42Q96MM3 310 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 MRPL4Q9BYD3 311 aaKnown RBP29.05■■■□□ 2.24
CDK9-202ENST00000421939 DNAJB4Q9UDY4 337 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 PCDHGC5Q9Y5F6 944 aa29.05■■■□□ 2.24
CDK9-202ENST00000421939 PPP6R2O75170 966 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 KRT18P05783 430 aaKnown RBP29.04■■■□□ 2.24
CDK9-202ENST00000421939 GALTP07902 379 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 SMTNP53814 917 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 HYAL1Q12794 435 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 RRAGBQ5VZM2 374 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 PDE12Q6L8Q7 609 aaKnown RBP29.04■■■□□ 2.24
CDK9-202ENST00000421939 TMEM173Q86WV6 379 aaPredicted RBP29.04■■■□□ 2.24
CDK9-202ENST00000421939 MICAL1Q8TDZ2 1067 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 PABPC5Q96DU9 382 aaKnown RBP29.04■■■□□ 2.24
CDK9-202ENST00000421939 TMEM169Q96HH4 297 aa29.04■■■□□ 2.24
CDK9-202ENST00000421939 FAM193BQ96PV7 902 aaPredicted RBP29.04■■■□□ 2.24
CDK9-202ENST00000421939 LARSQ9P2J5 1176 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms