RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 LRRIQ4A6NIV6 560 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 SPATA31C1P0DKV0 1188 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 SLC11A1P49279 550 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 MBTD1Q05BQ5 628 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 C8orf34Q49A92 452 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 ZNF280BQ86YH2 543 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 CPB2Q96IY4 423 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 RPGRIP1Q96KN7 1286 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 PRIMPOLQ96LW4 560 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 NECTIN4Q96NY8 510 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 EMILIN2Q9BXX0 1053 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 C2orf40Q9H1Z8 148 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 SSX2IPQ9Y2D8 614 aa23.65■■□□□ 1.38
PTPN4-202ENST00000420482 ARHGEF35A5YM69 484 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 CLASP2O75122 1294 aaKnown RBP23.64■■□□□ 1.37
PTPN4-202ENST00000420482 POMCP01189 267 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 RABEP1Q15276 862 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 SLC27A1Q6PCB7 646 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 SYCE2Q6PIF2 218 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 TMEM173Q86WV6 379 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-202ENST00000420482 SMG8Q8ND04 991 aaKnown RBP23.64■■□□□ 1.37
PTPN4-202ENST00000420482 S1PR5Q9H228 398 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 KCNH6Q9H252 994 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 PRMT7Q9NVM4 692 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-202ENST00000420482 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-202ENST00000420482 GIT1Q9Y2X7 761 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 NR2E1Q9Y466 385 aa23.64■■□□□ 1.37
PTPN4-202ENST00000420482 ARL5CA6NH57 179 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 MED24O75448 989 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 ARF4P18085 180 aaPredicted RBP23.63■■□□□ 1.37
PTPN4-202ENST00000420482 MAEAQ7L5Y9 396 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 RIPOR3Q96MK2 946 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 KIF2CQ99661 725 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 APOL5Q9BWW9 433 aa23.63■■□□□ 1.37
PTPN4-202ENST00000420482 EIF2AQ9BY44 585 aaKnown RBP23.63■■□□□ 1.37
PTPN4-202ENST00000420482 DDHD2O94830 711 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 MTHFRP42898 656 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 FXR2P51116 673 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTPN4-202ENST00000420482 PPP2R5AQ15172 486 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 TMEM132AQ24JP5 1023 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 POTEGQ6S5H5 508 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 PADI6Q6TGC4 694 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 EDAQ92838 391 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 ADAM7Q9H2U9 754 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 MRPL17Q9NRX2 175 aaKnown RBP23.62■■□□□ 1.37
PTPN4-202ENST00000420482 LRWD1Q9UFC0 647 aa23.62■■□□□ 1.37
PTPN4-202ENST00000420482 A0A087WWV3 80 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 SPDYE4A6NLX3 237 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 NRP1O14786 923 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 INPPL1O15357 1258 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 U2AF2P26368 475 aaKnown RBP eCLIP23.61■■□□□ 1.373e-6■■■□□ 15.4
PTPN4-202ENST00000420482 CCT6AP40227 531 aaKnown RBP23.61■■□□□ 1.37
PTPN4-202ENST00000420482 MLH1P40692 756 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 OR1G1P47890 313 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 AMHR2Q16671 573 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 ELMSAN1Q6PJG2 1045 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 PPP4R3CPQ6ZMV5 832 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 MFSD14AQ96MC6 490 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 GAD1Q99259 594 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 APOL6Q9BWW8 343 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 ZMYM2Q9UBW7 1377 aa23.61■■□□□ 1.37
PTPN4-202ENST00000420482 A0A1B0GUA9 196 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 LAD1O00515 517 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 URODP06132 367 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 CYP11B2P19099 503 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 PDIA5Q14554 519 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 HFE2Q6ZVN8 426 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 BCL7CQ8WUZ0 217 aaPredicted RBP23.6■■□□□ 1.37
PTPN4-202ENST00000420482 AUTS2Q8WXX7 1259 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 IFT74Q96LB3 600 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 GPRC5CQ9NQ84 441 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 DPP7Q9UHL4 492 aa23.6■■□□□ 1.37
PTPN4-202ENST00000420482 N4BP3O15049 544 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 NPTXRO95502 500 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 KLRC2P26717 231 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 AFF1P51825 1210 aaKnown RBP23.59■■□□□ 1.37
PTPN4-202ENST00000420482 PTPN14Q15678 1187 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 MAPK6Q16659 721 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 ATAT1Q5SQI0 421 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 CDCA2Q69YH5 1023 aaPredicted RBP23.59■■□□□ 1.37
PTPN4-202ENST00000420482 CABP7Q86V35 215 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 COLGALT2Q8IYK4 626 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 DEPTORQ8TB45 409 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 RPS6KC1Q96S38 1066 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 ADPGKQ9BRR6 497 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 COLEC11Q9BWP8 271 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 NXF3Q9H4D5 531 aaKnown RBP23.59■■□□□ 1.37
PTPN4-202ENST00000420482 PARP2Q9UGN5 583 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 PRG3Q9Y2Y8 225 aaPredicted RBP23.59■■□□□ 1.37
PTPN4-202ENST00000420482 HES2Q9Y543 173 aa23.59■■□□□ 1.37
PTPN4-202ENST00000420482 KMT2EQ8IZD2 1858 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 WDFY4Q6ZS81 3184 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 B4GALT5O43286 388 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 SOD2P04179 222 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 SSBP05455 408 aaKnown RBP eCLIP23.58■■□□□ 1.37
PTPN4-202ENST00000420482 NAMPTP43490 491 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 SCNN1GP51170 649 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 FAM187BQ17R55 369 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 ZBTB33Q86T24 672 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 ALYREFQ86V81 257 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms