RNA–Protein interactions for RNA: ENST00000419652.5

NR1H3-206, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-206ENST00000419652 SFI1A8K8P3 1242 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 K7ENM7 598 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 SCP2P22307 547 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 PPM1AP35813 382 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 DCAF4L1Q3SXM0 396 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 NAALADL2Q58DX5 795 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 ARSHQ5FYA8 562 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 NOMO2Q5JPE7 1267 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
NR1H3-206ENST00000419652 THNSL1Q8IYQ7 743 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 P2RX5Q93086 422 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
NR1H3-206ENST00000419652 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
NR1H3-206ENST00000419652 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 LRRC27Q9C0I9 530 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-206ENST00000419652 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 PDZD7Q9H5P4 517 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 TMEM134Q9H6X4 195 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
NR1H3-206ENST00000419652 LINC00271P0C7V0 271 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-206ENST00000419652 ABCD1P33897 745 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 ATF7IP2Q5U623 682 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-206ENST00000419652 IQUBQ8NA54 791 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 COLGALT1Q8NBJ5 622 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 SLC17A8Q8NDX2 589 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 BICD1Q96G01 975 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 FAM193BQ96PV7 902 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-206ENST00000419652 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 NXF3Q9H4D5 531 aaKnown RBP17.29■□□□□ 0.36
NR1H3-206ENST00000419652 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 MTCH2Q9Y6C9 303 aa17.29■□□□□ 0.36
NR1H3-206ENST00000419652 MEIS3P2A8K0S8 358 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 LPXNO60711 386 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 ZC3H11AO75152 810 aaKnown RBP eCLIP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 GIT2Q14161 759 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 CCDC85BQ15834 202 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 AXDND1Q5T1B0 1012 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 SMG8Q8ND04 991 aaKnown RBP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 TMEM161BQ8NDZ6 487 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 DHX58Q96C10 678 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 MRPL38Q96DV4 380 aaKnown RBP17.28■□□□□ 0.36
NR1H3-206ENST00000419652 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 TBC1D13Q9NVG8 400 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 RCOR1Q9UKL0 485 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 HES2Q9Y543 173 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
NR1H3-206ENST00000419652 TRAK2O60296 914 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 OFD1O75665 1012 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 MAPTP10636 758 aaKnown RBP17.27■□□□□ 0.36
NR1H3-206ENST00000419652 MLH1P40692 756 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 ALDH7A1P49419 539 aaKnown RBP17.27■□□□□ 0.36
NR1H3-206ENST00000419652 ZNF131P52739 623 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 NCKAP1LP55160 1127 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 AMPD3Q01432 767 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 ZNF568Q3ZCX4 644 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 DYMQ7RTS9 669 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 KLHL23Q8NBE8 558 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-206ENST00000419652 DDX12PQ92771 950 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.36
NR1H3-206ENST00000419652 TCHPQ9BT92 498 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 GBP3Q9H0R5 595 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 TNMDQ9H2S6 317 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 CWH43Q9H720 699 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 HCSTQ9UBK5 93 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 TNFSF13BQ9Y275 285 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 GIT1Q9Y2X7 761 aa17.27■□□□□ 0.36
NR1H3-206ENST00000419652 A0A087X0B3 334 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 CSPG5O95196 566 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 POMCP01189 267 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 IDEP14735 1019 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 GAP43P17677 238 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.35
NR1H3-206ENST00000419652 KRT17Q04695 432 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 UBE3AQ05086 875 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 RESP18Q5W5W9 173 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 KCNT2Q6UVM3 1135 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 HAUS6Q7Z4H7 955 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 PPP2R3CQ969Q6 453 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 ALG13Q9NP73 1137 aaKnown RBP17.26■□□□□ 0.35
NR1H3-206ENST00000419652 ANKFY1Q9P2R3 1169 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
NR1H3-206ENST00000419652 ARL5CA6NH57 179 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms