RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
HMGB3-202ENST00000419110 NDST4Q9H3R1 872 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
HMGB3-202ENST00000419110 SUGCTQ9HAC7 445 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 POLD4Q9HCU8 107 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 PDLIM7Q9NR12 457 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 RNF186Q9NXI6 227 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 HSPBP1Q9NZL4 362 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 GCNT4Q9P109 453 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 ANKFY1Q9P2R3 1169 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 SUCLA2Q9P2R7 463 aaPredicted RBP6.51□□□□□ -1.37
HMGB3-202ENST00000419110 GABRQQ9UN88 632 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 AKT3Q9Y243 479 aa6.51□□□□□ -1.37
HMGB3-202ENST00000419110 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 CNTNAP2Q9UHC6 1331 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 IGKV6-21A0A0C4DH24 114 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ESPNB1AK53 854 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ZBTB42B2RXF5 422 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 AKR1B15C9JRZ8 316 aaPredicted RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ASAP2O43150 1006 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 TEX33O43247 280 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 CCP110O43303 1012 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MAP3K7O43318 606 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ADCY3O60266 1144 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MSCO60682 206 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 AKAP3O75969 853 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ERLIN2O94905 339 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 PIGRP01833 764 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 IGHA2P01877 340 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 RPLP2P05387 115 aaKnown RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 SMIM10L2AP0DMW4 78 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 SMIM10L2BP0DMW5 78 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 GNAT1P11488 350 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ELNP15502 786 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 RFX1P22670 979 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 PBX1P40424 430 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MXI1P50539 228 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 GJA9P57773 515 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 KCNA1Q09470 495 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 LAMTOR4Q0VGL1 99 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 CETN1Q12798 172 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 NR1I3Q14994 352 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 SNRNP35Q16560 246 aaKnown RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 TSR1Q2NL82 804 aaKnown RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MIIPQ5JXC2 388 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 PRAMEF19Q5SWL8 479 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 TMEM63BQ5T3F8 832 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 SLFN12LQ6IEE8 588 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ZPBP2Q6X784 338 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ZNF410Q86VK4 478 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 KSR1Q8IVT5 923 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 GPD1LQ8N335 351 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 ZNF397Q8NF99 534 aaPredicted RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 NEK11Q8NG66 645 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 CBWD1Q9BRT8 395 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MTG1Q9BT17 334 aaPredicted RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 MSTO1Q9BUK6 570 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 LSM14BQ9BX40 385 aaKnown RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 NFKBIZQ9BYH8 718 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 TMEM134Q9H6X4 195 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 KIAA1586Q9HCI6 787 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 XPNPEP3Q9NQH7 507 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 PRMT7Q9NVM4 692 aaPredicted RBP6.5□□□□□ -1.37
HMGB3-202ENST00000419110 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 DAAM1Q9Y4D1 1078 aa6.5□□□□□ -1.37
HMGB3-202ENST00000419110 TSC2P49815 1807 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 C17orf102A2RUQ5 167 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 GTPBP10A4D1E9 387 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 LRRC10BA6NIK2 292 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 INO80B-WBP1J3KQ70 363 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 K7ERI5 159 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 M0QZ92 97 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 ARHGAP6O43182 974 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CLSTN1O94985 981 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 IPO7O95373 1038 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 LDHAP00338 332 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 GYPCP04921 128 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 INHAP05111 366 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 ADRB2P07550 413 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CYP2C9P11712 490 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 HARSP12081 509 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CST5P28325 142 aaPredicted RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 KCNJ6P48051 423 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CASP4P49662 377 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 PURAQ00577 322 aaKnown RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 BEX3Q00994 111 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 MAP2K1Q02750 393 aaPredicted RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 ENPEPQ07075 957 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 TBX2Q13207 712 aaPredicted RBP6.49□□□□□ -1.37
HMGB3-202ENST00000419110 EXOC3L4Q17RC7 722 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 EFCAB12Q6NXP0 572 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 TAF2Q6P1X5 1199 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 NFRKBQ6P4R8 1299 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 MTHFD1LQ6UB35 978 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 GBP6Q6ZN66 633 aa6.49□□□□□ -1.37
HMGB3-202ENST00000419110 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms