RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 AGMOQ6ZNB7 445 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 DYMQ7RTS9 669 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 TGS1Q96RS0 853 aaKnown RBP20.53■□□□□ 0.88
PTCD3-204ENST00000418628 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 GOLPH3LQ9H4A5 285 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 PTPRHQ9HD43 1115 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 OLFML3Q9NRN5 406 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 SEL1LQ9UBV2 794 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 IPPQ9Y573 584 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 A0A1B0GVL5 298 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 H0YCG3 227 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 K7ERI5 159 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 N4BP3O15049 544 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 TRAK2O60296 914 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 KRT18P05783 430 aaKnown RBP20.52■□□□□ 0.88
PTCD3-204ENST00000418628 EEF1DP3Q658K8 133 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 HAUS6Q7Z4H7 955 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 SFR1Q86XK3 245 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 FIBCD1Q8N539 461 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 CNNM3Q8NE01 707 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 ACO2Q99798 780 aaKnown RBP20.52■□□□□ 0.88
PTCD3-204ENST00000418628 C7orf25Q9BPX7 421 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 TNFSF13BQ9Y275 285 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 USP20Q9Y2K6 914 aa20.52■□□□□ 0.88
PTCD3-204ENST00000418628 MRPL42Q9Y6G3 142 aaKnown RBP20.52■□□□□ 0.88
PTCD3-204ENST00000418628 VWA8A3KMH1 1905 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 C5orf67F2Z3F1 127 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 PIGRP01833 764 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 SLFN14P0C7P3 912 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 GAP43P17677 238 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 NDUFA8P51970 172 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 GTF2BQ00403 316 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 EHHADHQ08426 723 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 NCBP1Q09161 790 aaKnown RBP20.51■□□□□ 0.87
PTCD3-204ENST00000418628 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-204ENST00000418628 CDR2LQ86X02 465 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-204ENST00000418628 MYCT1Q8N699 235 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 SLC17A8Q8NDX2 589 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
PTCD3-204ENST00000418628 STAMQ92783 540 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 LPPQ93052 612 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 SAMD11Q96NU1 681 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 C17orf80Q9BSJ5 609 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 MRPL4Q9BYD3 311 aaKnown RBP20.51■□□□□ 0.87
PTCD3-204ENST00000418628 USP25Q9UHP3 1055 aa20.51■□□□□ 0.87
PTCD3-204ENST00000418628 K7ENM7 598 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 LPXNO60711 386 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 PAN2Q504Q3 1202 aaKnown RBP20.5■□□□□ 0.87
PTCD3-204ENST00000418628 ATF7IP2Q5U623 682 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 LRRC55Q6ZSA7 311 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 FAM178BQ8IXR5 827 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 LRRC43Q8N309 656 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 HELQQ8TDG4 1101 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 NXF3Q9H4D5 531 aaKnown RBP20.5■□□□□ 0.87
PTCD3-204ENST00000418628 CWH43Q9H720 699 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 HCSTQ9UBK5 93 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 RWDD3Q9Y3V2 267 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 COL6A3P12111 3177 aa20.5■□□□□ 0.87
PTCD3-204ENST00000418628 EYSQ5T1H1 3165 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 OFD1O75665 1012 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 NPTXRO95502 500 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 NMT1P30419 496 aaKnown RBP20.49■□□□□ 0.87
PTCD3-204ENST00000418628 COASYQ13057 564 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 DCAF4L1Q3SXM0 396 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 EPC2Q52LR7 807 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 ZPBP2Q6X784 338 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 MAP4K3Q8IVH8 894 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
PTCD3-204ENST00000418628 CDX2Q99626 313 aaPredicted RBP20.49■□□□□ 0.87
PTCD3-204ENST00000418628 TARS2Q9BW92 718 aaKnown RBP20.49■□□□□ 0.87
PTCD3-204ENST00000418628 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 RSAD1Q9HA92 442 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 TBX20Q9UMR3 447 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 HES2Q9Y543 173 aa20.49■□□□□ 0.87
PTCD3-204ENST00000418628 POU3F3P20264 500 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-204ENST00000418628 IBSPP21815 317 aaPredicted RBP20.48■□□□□ 0.87
PTCD3-204ENST00000418628 ABCD1P33897 745 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 SYKP43405 635 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 AMPD3Q01432 767 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 ZNF720Q7Z2F6 126 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 HVCN1Q96D96 273 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 MRPL9Q9BYD2 267 aaKnown RBP20.48■□□□□ 0.87
PTCD3-204ENST00000418628 FGFBP2Q9BYJ0 223 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 CDT1Q9H211 546 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 PRDM12Q9H4Q4 367 aa20.48■□□□□ 0.87
PTCD3-204ENST00000418628 LIG1P18858 919 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 BMPR1AP36894 532 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 ADGRE1Q14246 886 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 SLC39A4Q6P5W5 647 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 GLB1LQ6UWU2 654 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 MPZL3Q6UWV2 235 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms