RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GNRHR2Q96P88 292 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 GPHA2Q96T91 129 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 NELFAQ9H3P2 528 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 IL23AQ9NPF7 189 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 TLR9Q9NR96 1032 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 RBM12Q9NTZ6 932 aaKnown RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 PPP4R1LQ9P1A2 415 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 SAP30BPQ9UHR5 308 aaKnown RBP3.48□□□□□ -1.85
VPS41-206ENST00000418457 RAPGEFL1Q9UHV5 662 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 SCOCQ9UIL1 159 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 TUBD1Q9UJT1 453 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 DNM3Q9UQ16 869 aa3.48□□□□□ -1.85
VPS41-206ENST00000418457 CCDC88BA6NC98 1476 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 FAM171A2A8MVW0 826 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 CT47B1P0C2W7 299 aaPredicted RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 HSP90B1P14625 803 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 GSPT1P15170 499 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 GYPEP15421 78 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 C5AR1P21730 350 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ECHS1P30084 290 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 RPS19P39019 145 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 RAB27AP51159 221 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ADKP55263 362 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 NPEPPSP55786 919 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 KIF23Q02241 960 aaPredicted RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 PPP3CAQ08209 521 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 PIN1Q13526 163 aaPredicted RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 SAFB2Q14151 953 aaKnown RBP eCLIP3.47□□□□□ -1.85
VPS41-206ENST00000418457 NOMO1Q15155 1222 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ERICH6BQ5W0A0 696 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 LIMS2Q7Z4I7 341 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ADGRE4PQ86SQ3 457 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 CMTM4Q8IZR5 234 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 THEMISQ8N1K5 641 aaPredicted RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 CPA6Q8N4T0 437 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 OR5M3Q8NGP4 307 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ZNF480Q8WV37 535 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 C20orf173Q96LM9 149 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 OR14A2Q96R54 314 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 TCF25Q9BQ70 676 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 BDH2Q9BUT1 245 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 PLA2G12BQ9BX93 195 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 CSRNP2Q9H175 543 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 METTL14Q9HCE5 456 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 DMRT3Q9NQL9 472 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 IP6K2Q9UHH9 426 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 THRAP3Q9Y2W1 955 aaKnown RBP3.47□□□□□ -1.85
VPS41-206ENST00000418457 GIT1Q9Y2X7 761 aa3.47□□□□□ -1.85
VPS41-206ENST00000418457 ABCC8Q09428 1581 aa3.46□□□□□ -1.85
VPS41-206ENST00000418457 PEG3Q9GZU2 1588 aa3.46□□□□□ -1.85
VPS41-206ENST00000418457 VPS8Q8N3P4 1428 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 UBE2QL1A1L167 161 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 AKAP10O43572 662 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ENDOD1O94919 500 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ABLIM3O94929 683 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 IL33O95760 270 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 GASTP01350 101 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 HMGB1P09429 215 aaKnown RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 PF4V1P10720 104 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 VCAM1P19320 739 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 CRHR1P34998 444 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 CASRP41180 1078 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 CTSWP56202 376 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 PER3P56645 1201 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 MGAT2Q10469 447 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 DUSP8Q13202 625 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 MST1LQ2TV78 715 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 UAP1L1Q3KQV9 507 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 TCTN3Q6NUS6 607 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 CMTR2Q8IYT2 770 aaKnown RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 GPR135Q8IZ08 494 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 MIER2Q8N344 545 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 NRG4Q8WWG1 115 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ARL8AQ96BM9 186 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 HSPBAP1Q96EW2 488 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 TMEM176AQ96HP8 235 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 UHRF1Q96T88 793 aaPredicted RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 CDC5LQ99459 802 aaKnown RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 AGO3Q9H9G7 860 aaKnown RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 TCF7L1Q9HCS4 588 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 GPRC5DQ9NZD1 345 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ZIM2Q9NZV7 527 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 KLHL42Q9P2K6 505 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 TCEAL9Q9UHQ7 104 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ZNF180Q9UJW8 692 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 INTUQ9ULD6 942 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.86
VPS41-206ENST00000418457 EID1Q9Y6B2 187 aa3.46□□□□□ -1.86
VPS41-206ENST00000418457 GPR42O15529 346 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 ITGA10O75578 1167 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 RAD17O75943 681 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 ZRANB2O95218 330 aaKnown RBP eCLIP3.45□□□□□ -1.86
VPS41-206ENST00000418457 ITGB3P05106 788 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 ZSCAN20P17040 1043 aaPredicted RBP3.45□□□□□ -1.86
VPS41-206ENST00000418457 WASP42768 502 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 GZMKP49863 264 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 PLP2Q04941 152 aa3.45□□□□□ -1.86
VPS41-206ENST00000418457 GRM7Q14831 915 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms