RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CARD9Q9H257 536 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 HAUS2Q9NVX0 235 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 MRPL11Q9Y3B7 192 aaKnown RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 MYH11P35749 1972 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 CES2O00748 559 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 TRAPPC3O43617 180 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 PRUNE1Q86TP1 453 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 CACNA2D3Q8IZS8 1091 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 JPH2Q9BR39 696 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-202ENST00000418310 HEMGNQ9BXL5 484 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF341Q9BYN7 854 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 TMEM117Q9H0C3 514 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 SERPINA10Q9UK55 444 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 VCAM1P19320 739 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 GPC5P78333 572 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 SPP2Q13103 211 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 DUPD1Q68J44 220 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ANKRD42Q8N9B4 389 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 XXYLT1Q8NBI6 393 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 LMO3Q8TAP4 145 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF564Q8TBZ8 553 aaPredicted RBP12.8□□□□□ -0.36
LIMK1-202ENST00000418310 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 DDX23Q9BUQ8 820 aaKnown RBP12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 OSBPL7Q9BZF2 842 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 NCANO14594 1321 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 KIAA0391O15091 583 aaKnown RBP12.8□□□□□ -0.36
LIMK1-202ENST00000418310 MMP14P50281 582 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 BIRC3Q13489 604 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 PASD1Q8IV76 773 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 CHURC1Q8WUH1 139 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 KREMEN1Q96MU8 473 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 TBK1Q9UHD2 729 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
LIMK1-202ENST00000418310 DNM1LO00429 736 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ATP9AO75110 1047 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 RARRES1P49788 294 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ZDHHC24Q6UX98 284 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 CEP57Q86XR8 500 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 PRMT1Q99873 361 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ZSWIM1Q9BR11 485 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 MXRA8Q9BRK3 442 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 INTUQ9ULD6 942 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF831Q5JPB2 1677 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 VIL1P09327 827 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 CREB1P16220 341 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 NF2P35240 595 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 TNIP1Q15025 636 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 INTS8Q75QN2 995 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 TATDN2Q93075 761 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 MRRFQ96E11 262 aaKnown RBP12.79□□□□□ -0.36
LIMK1-202ENST00000418310 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 ZDHHC18Q9NUE0 388 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 CTNNAL1Q9UBT7 734 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
LIMK1-202ENST00000418310 PIK3CDO00329 1044 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 RARAP10276 462 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 YWHABP31946 246 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 FAM133BQ5BKY9 247 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CAPN12Q6ZSI9 719 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 EPB41L4BQ9H329 900 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 USTQ9Y2C2 406 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 A6NNZ2 444 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 PHF2O75151 1096 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 GJB6O95452 261 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CPP00450 1065 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 FNTAP49354 379 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF131P52739 623 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 MTMR1Q13613 665 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 E2F5Q15329 346 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms