RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 UGCGQ16739 394 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 EPC2Q52LR7 807 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 HAUS6Q7Z4H7 955 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PRPF38AQ8NAV1 312 aaKnown RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 EPS8L1Q8TE68 723 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 NAP1L3Q99457 506 aaPredicted RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 ZSWIM1Q9BR11 485 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 OSBPL7Q9BZF2 842 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 UBE4BO95155 1302 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 COL11A2P13942 1736 aaPredicted RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 FSBPO95073 299 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PEX5P50542 639 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC137Q6PK04 289 aaKnown RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PHLDB2Q86SQ0 1253 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 XXYLT1Q8NBI6 393 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 SEC16BQ96JE7 1060 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 CABS1Q96KC9 395 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PAGR1Q9BTK6 254 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PABPC3Q9H361 631 aaKnown RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 CCPG1Q9ULG6 757 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 TRPC6Q9Y210 931 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 DIS3Q9Y2L1 958 aaKnown RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 MYH11P35749 1972 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 DNM1LO00429 736 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SOX10P56693 466 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 CETN1Q12798 172 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 BYSLQ13895 437 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 PLA2G4FQ68DD2 849 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 CPLX4Q7Z7G2 160 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SPATS2Q86XZ4 545 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC13Q8IYE1 715 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 UBL4BQ8N7F7 174 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 DHX38Q92620 1227 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SELENOSQ9BQE4 189 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 MTFR1LQ9H019 292 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 AZI2Q9H6S1 392 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 TOPORSQ9NS56 1045 aaPredicted RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 C21orf2O43822 256 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 PHF2O75151 1096 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 P4HBP07237 508 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 ADSSP30520 456 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 MXI1P50539 228 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 MNAT1P51948 309 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 SETQ01105 290 aaPredicted RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 DENND2CQ68D51 928 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 YTHDF3Q7Z739 585 aaKnown RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 CNPY4Q8N129 248 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 TLCD1Q96CP7 247 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 ACCSQ96QU6 501 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 RIT2Q99578 217 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 TMOD2Q9NZR1 351 aa15.59■□□□□ 0.09
HDAC9-208ENST00000417496 ZNF70Q9UC06 446 aaPredicted RBP15.59■□□□□ 0.09
HDAC9-208ENST00000417496 RTN2O75298 545 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 PLS3P13797 630 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 CHN1P15882 459 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 YWHABP31946 246 aaKnown RBP15.58■□□□□ 0.09
HDAC9-208ENST00000417496 MRPS9P82933 396 aaKnown RBP15.58■□□□□ 0.09
HDAC9-208ENST00000417496 DHX34Q14147 1143 aaKnown RBP15.58■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC38Q502W7 563 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 C2CD6Q53TS8 623 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC25Q86WR0 208 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC105Q8IYK2 499 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 EPS8L3Q8TE67 593 aaKnown RBP15.58■□□□□ 0.09
HDAC9-208ENST00000417496 NUP85Q9BW27 656 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 TMEM206Q9H813 350 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 EHMT1Q9H9B1 1298 aa15.58■□□□□ 0.09
HDAC9-208ENST00000417496 SLX4Q8IY92 1834 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 ZNF536O15090 1300 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 FAM187AA6NFU0 413 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 SPOPO43791 374 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 ATP9AO75110 1047 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 RARAP10276 462 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
HDAC9-208ENST00000417496 ACTN3Q08043 901 aaPredicted RBP15.58■□□□□ 0.08
HDAC9-208ENST00000417496 FAM102BQ5T8I3 360 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 C11orf63Q6NUN7 778 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 PCDHA3Q9Y5H8 950 aa15.58■□□□□ 0.08
HDAC9-208ENST00000417496 SYNGAP1Q96PV0 1343 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 ATXN2Q99700 1313 aaKnown RBP15.57■□□□□ 0.08
HDAC9-208ENST00000417496 CCDC169A6NNP5 214 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 APBA3O96018 575 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 FMO1Q01740 532 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 SNX1Q13596 522 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 RASA3Q14644 834 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 NBPF9Q3BBW0 867 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 TKFCQ3LXA3 575 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 CCDC121Q6ZUS5 278 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 TRIM7Q9C029 511 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 ADAM7Q9H2U9 754 aa15.57■□□□□ 0.08
HDAC9-208ENST00000417496 DBR1Q9UK59 544 aaKnown RBP15.57■□□□□ 0.08
HDAC9-208ENST00000417496 GOLGA6L7A0A1B0GV03 622 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms