RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 H3BQV1 296 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 LILRB3O75022 631 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 SRFP11831 508 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 POTEDQ86YR6 584 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 SLC5A5Q92911 643 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 MYADMQ96S97 322 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 EPS15L1Q9UBC2 864 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 SIT1Q9Y3P8 196 aa20.07■□□□□ 0.8
VCP-202ENST00000417448 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 CHMP2AO43633 222 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 SSBP05455 408 aaKnown RBP eCLIP20.06■□□□□ 0.8
VCP-202ENST00000417448 KLRC2P26717 231 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 GBP2P32456 591 aaPredicted RBP20.06■□□□□ 0.8
VCP-202ENST00000417448 PHKA2P46019 1235 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 SLC11A1P49279 550 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 SETQ01105 290 aaPredicted RBP20.06■□□□□ 0.8
VCP-202ENST00000417448 ZNF174Q15697 407 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 PHLDB3Q6NSJ2 640 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 ETNPPLQ8TBG4 499 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 FOXQ1Q9C009 403 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
VCP-202ENST00000417448 ARHGEF3Q9NR81 526 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
VCP-202ENST00000417448 MAGEB2O15479 319 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 LRRN2O75325 713 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 ATXN1P54253 815 aaKnown RBP20.05■□□□□ 0.8
VCP-202ENST00000417448 LRCH2Q5VUJ6 765 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 NOSTRINQ8IVI9 506 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 HAS1Q92839 578 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 UNC45AQ9H3U1 944 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 WDR6Q9NNW5 1121 aaKnown RBP20.05■□□□□ 0.8
VCP-202ENST00000417448 MAN1C1Q9NR34 630 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 DACT1Q9NYF0 836 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 CEP131Q9UPN4 1083 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 DOCK6Q96HP0 2047 aa20.05■□□□□ 0.8
VCP-202ENST00000417448 CLUHO75153 1309 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 MTCL1Q9Y4B5 1905 aaKnown RBP20.04■□□□□ 0.8
VCP-202ENST00000417448 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
VCP-202ENST00000417448 GAS7O60861 476 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 MCM7P33993 719 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 TOB1P50616 345 aaPredicted RBP20.04■□□□□ 0.8
VCP-202ENST00000417448 PPP4R3AQ6IN85 833 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 FERMT3Q86UX7 667 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 ZNF280BQ86YH2 543 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 ST13P5Q8NFI4 369 aaPredicted RBP20.04■□□□□ 0.8
VCP-202ENST00000417448 CMASQ8NFW8 434 aaPredicted RBP20.04■□□□□ 0.8
VCP-202ENST00000417448 PJA1Q8NG27 643 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 EMILIN2Q9BXX0 1053 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 GBP3Q9H0R5 595 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 TMEM60Q9H2L4 133 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 TBC1D22BQ9NU19 505 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 GABBR1Q9UBS5 961 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 INPP5FQ9Y2H2 1132 aa20.04■□□□□ 0.8
VCP-202ENST00000417448 RFPL2O75678 378 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 PSMD10O75832 226 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 MYBP10242 640 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 U2AF2P26368 475 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■□□□□ 10.7
VCP-202ENST00000417448 DRP2Q13474 957 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 NOMO2Q5JPE7 1267 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 MOXD1Q6UVY6 613 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 TRAIPQ9BWF2 469 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 TEKT3Q9BXF9 490 aa20.03■□□□□ 0.8
VCP-202ENST00000417448 CCDC195A0A1B0GUA6 201 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 ZNF862O60290 1169 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 MARCH6O60337 910 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 KINO60870 393 aaKnown RBP20.02■□□□□ 0.8
VCP-202ENST00000417448 OFD1O75665 1012 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 SYT1P21579 422 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 TMOD1P28289 359 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 ZNF746Q6NUN9 644 aaPredicted RBP20.02■□□□□ 0.8
VCP-202ENST00000417448 GLB1LQ6UWU2 654 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 NLRP7Q8WX94 980 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 INTS4Q96HW7 963 aaKnown RBP20.02■□□□□ 0.8
VCP-202ENST00000417448 SCLT1Q96NL6 688 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 KCNMB3Q9NPA1 279 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 SAMM50Q9Y512 469 aa20.02■□□□□ 0.8
VCP-202ENST00000417448 EML1O00423 815 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 INPPL1O15357 1258 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 DDHD2O94830 711 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 GCFC2P16383 781 aaKnown RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 AFF1P51825 1210 aaKnown RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 RNASELQ05823 741 aaKnown RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 TTC38Q5R3I4 469 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 VARS2Q5ST30 1063 aaKnown RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 FOXD4L5Q5VV16 416 aaPredicted RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 SMAP1Q8IYB5 467 aaPredicted RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 ZNF710Q8N1W2 664 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 FOXD4L4Q8WXT5 416 aaPredicted RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 RSPH1Q8WYR4 309 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 STAMQ92783 540 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 ZNF707Q96C28 371 aaPredicted RBP20.01■□□□□ 0.79
VCP-202ENST00000417448 RIT2Q99578 217 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 RHOBTB2Q9BYZ6 727 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 CHST12Q9NRB3 414 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 PCDHB6Q9Y5E3 794 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
VCP-202ENST00000417448 BAHCC1Q9P281 2608 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms