RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 POU5F1Q01860 360 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 KLRC3Q07444 240 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 VAC14Q08AM6 782 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CYLC2Q14093 348 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PKN1Q16512 942 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SLC18A3Q16572 532 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 RTN1Q16799 776 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 RABL6Q3YEC7 729 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ANKRD40Q6AI12 368 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 GRAMD4Q6IC98 578 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 RFWD3Q6PCD5 774 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 VSTM1Q6UX27 236 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 UNC13DQ70J99 1090 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ZBTB33Q86T24 672 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CYP4X1Q8N118 509 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 RASGEF1CQ8N431 466 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CCDC82Q8N4S0 544 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 METTL13Q8N6R0 699 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ANKRD42Q8N9B4 389 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 GDAP1Q8TB36 358 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CTNNBL1Q8WYA6 563 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 APPBP2Q92624 585 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NMD3Q96D46 503 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 MAGEB18Q96M61 343 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 C1QTNF2Q9BXJ5 285 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PITPNM3Q9BZ71 974 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PUS7LQ9H0K6 701 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 MLXIPLQ9NP71 852 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PFDN4Q9NQP4 134 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 USP40Q9NVE5 1235 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TBCCD1Q9NVR7 557 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 BTBD7Q9P203 1132 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 STX18Q9P2W9 335 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF180Q9UJW8 692 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CDV3Q9UKY7 258 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 EFR3BQ9Y2G0 817 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 AKAP12Q02952 1782 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NID2Q14112 1375 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DIP2AQ14689 1571 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 BTNL10A8MVZ5 291 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 WDR46O15213 610 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 MAGEB3O15480 346 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 GPAA1O43292 621 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 KLRC4O43908 158 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 HNRNPCL1O60812 293 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CBX6O95503 412 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ZBTB48P10074 688 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PYGMP11217 842 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 HARSP12081 509 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 STX2P32856 288 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TXKP42681 527 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 GALK1P51570 392 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PLTPP55058 493 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 HDAC4P56524 1084 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CDR2Q01850 454 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 FKBP4Q02790 459 aaKnown RBP eCLIP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ITGA9Q13797 1035 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CLPPQ16740 277 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 LINC01559Q495D7 138 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ACSBG2Q5FVE4 666 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SPDYAQ5MJ70 313 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TTC38Q5R3I4 469 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DUPD1Q68J44 220 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 CCDC174Q6PII3 467 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DSTYKQ6XUX3 929 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 OTUD6AQ7L8S5 288 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DAAM2Q86T65 1068 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DIS3LQ8TF46 1054 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ESR2Q92731 530 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ARHGEF2Q92974 986 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 STMN2Q93045 179 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DNAJC1Q96KC8 554 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SETDB2Q96T68 719 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ERP44Q9BS26 406 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TCHPQ9BT92 498 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PACSIN1Q9BY11 444 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 EDEM3Q9BZQ6 932 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SEMA4AQ9H3S1 761 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 SYNCQ9H7C4 482 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 KCNK9Q9NPC2 374 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TIMMDC1Q9NPL8 285 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 GPR108Q9NPR9 543 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 PLSCR2Q9NRY7 297 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 TUBA8Q9NY65 449 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NDUFA13Q9P0J0 144 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF711Q9Y462 761 aa6.84□□□□□ -1.31
CCNT1-202ENST00000417344 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.84□□□□□ -1.31
CCNT1-202ENST00000417344 NALCNQ8IZF0 1738 aa6.84□□□□□ -1.32
CCNT1-202ENST00000417344 PITPNM2Q9BZ72 1349 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 PRR36Q9H6K5 1346 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 PARP4Q9UKK3 1724 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 NPHP3-ACAD11A0A0J9YXS1 232 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 BOLA2-SMG1P6H3BVE0 249 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DDX3XO00571 662 aaKnown RBP eCLIP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms