RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SFMBT1Q9UHJ3 866 aa12.78□□□□□ -0.36
UBR4-205ENST00000417040 SERPINB4P48594 390 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 AARSP49588 968 aaKnown RBP eCLIP12.77□□□□□ -0.361e-6■□□□□ 8.7
UBR4-205ENST00000417040 IRAK1P51617 712 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 TSPY1Q01534 308 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 IMPG1Q17R60 797 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.36
UBR4-205ENST00000417040 RINLQ6ZS11 566 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 SEPT8Q92599 483 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 XPO6Q96QU8 1125 aaKnown RBP12.77□□□□□ -0.36
UBR4-205ENST00000417040 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.36
UBR4-205ENST00000417040 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 ZNF699Q32M78 642 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 PROM2Q8N271 834 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 TC2NQ8N9U0 490 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 CNBD2Q96M20 576 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 SLITRK6Q9H5Y7 841 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 ASNSD1Q9NWL6 643 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 LMTK3Q96Q04 1460 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.36
UBR4-205ENST00000417040 ATP9BO43861 1147 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 PAMP19021 973 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 PRELPP51888 382 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 RASGRP2Q7LDG7 609 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 ARHGAP18Q8N392 663 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 ZBTB10Q96DT7 871 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 EMSYQ7Z589 1322 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
UBR4-205ENST00000417040 KIAA1755Q5JYT7 1200 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.37
UBR4-205ENST00000417040 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 ACAP3Q96P50 834 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
UBR4-205ENST00000417040 ARHGEF9O43307 516 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 MRPS15P82914 257 aaKnown RBP12.77□□□□□ -0.37
UBR4-205ENST00000417040 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
UBR4-205ENST00000417040 C9orf72Q96LT7 481 aa12.77□□□□□ -0.37
UBR4-205ENST00000417040 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 ENO3P13929 434 aaPredicted RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 NR1I3Q14994 352 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 AGPAT1Q99943 283 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 LTKP29376 864 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 KLC1Q07866 573 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 BZW1Q7L1Q6 419 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 IP6K2Q9UHH9 426 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 SUGT1Q9Y2Z0 365 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 SKAP2O75563 359 aaPredicted RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 ESRRBO95718 433 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 SF3B3Q15393 1217 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 DPP9Q86TI2 863 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 DNAJC9Q8WXX5 260 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 CORO7P57737 925 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 ZC3H12BQ5HYM0 836 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 XXYLT1Q8NBI6 393 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 NAF1Q96HR8 494 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 ADCY3O60266 1144 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 TYK2P29597 1187 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 PRDX5P30044 214 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 LBRQ14739 615 aaKnown RBP12.76□□□□□ -0.37
UBR4-205ENST00000417040 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 ZNF667Q5HYK9 610 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 RNF139Q8WU17 664 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 V9GYQ6 96 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 CLASP1Q7Z460 1538 aa12.76□□□□□ -0.37
UBR4-205ENST00000417040 PDHBP11177 359 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 ADORA2BP29275 332 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
UBR4-205ENST00000417040 NOD2Q9HC29 1040 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 AKAP10O43572 662 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 RAD17O75943 681 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 OSBPP22059 807 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 MAP4P27816 1152 aaKnown RBP12.75□□□□□ -0.37
UBR4-205ENST00000417040 SERPINB3P29508 390 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 MTMR1Q13613 665 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 PPP1R2P3Q6NXS1 205 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 ADCK1Q86TW2 530 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 ATP11CQ8NB49 1132 aa12.75□□□□□ -0.37
UBR4-205ENST00000417040 IFT43Q96FT9 208 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms