RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
PAF1-202ENST00000416728 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
PAF1-202ENST00000416728 ANKEF1Q9NU02 776 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 LARGE1O95461 756 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 BRD1O95696 1058 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 URODP06132 367 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 CNPP09543 421 aaKnown RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 AVPR2P30518 371 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 MLH1P40692 756 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 CLCN4P51793 760 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 TCF15Q12870 199 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 IFNLR1Q8IU57 520 aaPredicted RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 DIS3L2Q8IYB7 885 aaKnown RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 HACE1Q8IYU2 909 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 PLCD3Q8N3E9 789 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 GAD1Q99259 594 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 TRIM6Q9C030 488 aaPredicted RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
PAF1-202ENST00000416728 HES2Q9Y543 173 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 TRIOO75962 3097 aa16.05■□□□□ 0.16
PAF1-202ENST00000416728 ZDBF2Q9HCK1 2354 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 ARL5CA6NH57 179 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 C2CD2LO14523 706 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 INPPL1O15357 1258 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 PDGFBP01127 241 aaPredicted RBP16.04■□□□□ 0.16
PAF1-202ENST00000416728 SOD2P04179 222 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 ASGR2P07307 311 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 TXKP42681 527 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 OR1G1P47890 313 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 RARRES1P49788 294 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 FOSBP53539 338 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 MBTD1Q05BQ5 628 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 CAPSQ13938 189 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 GPR149Q86SP6 731 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 COLGALT2Q8IYK4 626 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 APOL6Q9BWW8 343 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 MARCH5Q9NX47 278 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 LIMD1Q9UGP4 676 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
PAF1-202ENST00000416728 JAK2O60674 1132 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 LILRB3O75022 631 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 NR1I2O75469 434 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 ARL2P36404 184 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 SCNN1GP51170 649 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 DSC1Q08554 894 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 PIGOQ8TEQ8 1089 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
PAF1-202ENST00000416728 ZFP42Q96MM3 310 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 PHOX2BQ99453 314 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 NFKBIZQ9BYH8 718 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
PAF1-202ENST00000416728 NXF3Q9H4D5 531 aaKnown RBP16.03■□□□□ 0.16
PAF1-202ENST00000416728 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 WDFY4Q6ZS81 3184 aa16.03■□□□□ 0.16
PAF1-202ENST00000416728 WNT7AO00755 349 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.16
PAF1-202ENST00000416728 ADH1AP07327 375 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 ARF4P18085 180 aaPredicted RBP16.02■□□□□ 0.16
PAF1-202ENST00000416728 GLRA2P23416 452 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 GLUD2P49448 558 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 NEK4P51957 841 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 AMHR2Q16671 573 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 ELMSAN1Q6PJG2 1045 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 C15orf39Q6ZRI6 1047 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 FEZF2Q8TBJ5 459 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 MTMR9Q96QG7 549 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 IRF2BPLQ9H1B7 796 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 SMOC2Q9H3U7 446 aa16.02■□□□□ 0.16
PAF1-202ENST00000416728 POTEMA6NI47 508 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 B4GALT5O43286 388 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
PAF1-202ENST00000416728 NUBP1P53384 320 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 SLC27A1Q6PCB7 646 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 TAS1R1Q7RTX1 841 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 COLEC11Q9BWP8 271 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 MAN1C1Q9NR34 630 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 MIOSQ9NXC5 875 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 DPP7Q9UHL4 492 aa16.01■□□□□ 0.15
PAF1-202ENST00000416728 A0A087WWV3 80 aa16■□□□□ 0.15
PAF1-202ENST00000416728 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
PAF1-202ENST00000416728 TEX28O15482 410 aa16■□□□□ 0.15
PAF1-202ENST00000416728 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
PAF1-202ENST00000416728 GLUD1P00367 558 aa16■□□□□ 0.15
PAF1-202ENST00000416728 ATP2B1P20020 1258 aa16■□□□□ 0.15
PAF1-202ENST00000416728 AKAP5P24588 427 aa16■□□□□ 0.15
PAF1-202ENST00000416728 MCM7P33993 719 aa16■□□□□ 0.15
PAF1-202ENST00000416728 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
PAF1-202ENST00000416728 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms