RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 QARSP47897 775 aaKnown RBP11.2□□□□□ -0.62
MDC1-202ENST00000416571 NPEPPSP55786 919 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 SPECC1Q5M775 1068 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 ZC3H14Q6PJT7 736 aaKnown RBP11.2□□□□□ -0.62
MDC1-202ENST00000416571 B3GNT9Q6UX72 402 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 HACE1Q8IYU2 909 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 ETNPPLQ8TBG4 499 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 TCP11Q8WWU5 503 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 RSAD2Q8WXG1 361 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 NXPE3Q969Y0 559 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 TMEM143Q96AN5 459 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 TBC1D17Q9HA65 648 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 NCOA5Q9HCD5 579 aaKnown RBP11.2□□□□□ -0.62
MDC1-202ENST00000416571 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
MDC1-202ENST00000416571 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
MDC1-202ENST00000416571 ACACBO00763 2458 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 KRBA1A5PL33 1030 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 GAS2O43903 313 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 MARCH6O60337 910 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 N4BP1O75113 896 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 DEXIO95424 95 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 P4HBP07237 508 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 MLH1P40692 756 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 LAMTOR4Q0VGL1 99 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 PCBP1Q15365 356 aaKnown RBP eCLIP11.19□□□□□ -0.62
MDC1-202ENST00000416571 INF2Q27J81 1249 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 NOTUMQ6P988 496 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 CPLX2Q6PUV4 134 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 GET4Q7L5D6 327 aaPredicted RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 OTUD6AQ7L8S5 288 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 PALB2Q86YC2 1186 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 COLGALT2Q8IYK4 626 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 FBXL16Q8N461 479 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 SLC44A3Q8N4M1 653 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 HDAC7Q8WUI4 952 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 COLEC11Q9BWP8 271 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 RHOBTB2Q9BYZ6 727 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 TRIM6Q9C030 488 aaPredicted RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 PLEKHA4Q9H4M7 779 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 MINDY3Q9H8M7 445 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.19□□□□□ -0.62
MDC1-202ENST00000416571 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
MDC1-202ENST00000416571 IPPQ9Y573 584 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 SNX14Q9Y5W7 946 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 R4GN57 208 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 MTCL1Q9Y4B5 1905 aaKnown RBP11.19□□□□□ -0.62
MDC1-202ENST00000416571 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
MDC1-202ENST00000416571 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 MED19A0JLT2 244 aaPredicted RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 ARL5CA6NH57 179 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 ASAP2O43150 1006 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 LAMP2P13473 410 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 PDIA3P30101 505 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 AXLP30530 894 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 YWHABP31946 246 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 HSPA4P34932 840 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SCNN1GP51170 649 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 DSG1Q02413 1049 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 EMC2Q15006 297 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 XKR9Q5GH70 373 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 KIAA0319Q5VV43 1072 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 TAS1R1Q7RTX1 841 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 KIAA2013Q8IYS2 634 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 KCNB2Q92953 911 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 CNTNAP3BQ96NU0 1288 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 MYADMQ96S97 322 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 GAD1Q99259 594 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 MTRQ99707 1265 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 LXNQ9BS40 222 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 AGXT2Q9BYV1 514 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 RXFP1Q9HBX9 757 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 ARHGEF3Q9NR81 526 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SIT1Q9Y3P8 196 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 DMDP11532 3685 aa11.18□□□□□ -0.62
MDC1-202ENST00000416571 SETXQ7Z333 2677 aaKnown RBP11.18□□□□□ -0.62
MDC1-202ENST00000416571 VPS13AQ96RL7 3174 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms