RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 NRDE2Q9H7Z3 1164 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 VPS37CA5D8V6 355 aaPredicted RBP22.67■■□□□ 1.22
PTPRU-203ENST00000415600 C2orf71A6NGG8 1288 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 TSPAN1O60635 241 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 USO1O60763 962 aaKnown RBP22.67■■□□□ 1.22
PTPRU-203ENST00000415600 CXCL14O95715 111 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 ALDH2P05091 517 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 GALTP07902 379 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 CES5AQ6NT32 575 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 LLGL2Q6P1M3 1020 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 POLR3FQ9H1D9 316 aaPredicted RBP22.67■■□□□ 1.22
PTPRU-203ENST00000415600 TMEM60Q9H2L4 133 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.66■■□□□ 1.22
PTPRU-203ENST00000415600 FAM86C2PA6NEL3 165 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 MUTP22033 750 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 GSE1Q14687 1217 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 ZNF174Q15697 407 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 AGMOQ6ZNB7 445 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 CATSPER3Q86XQ3 398 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 ZBTB8OSQ8IWT0 167 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 CSRNP2Q9H175 543 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 DZANK1Q9NVP4 752 aa22.66■■□□□ 1.22
PTPRU-203ENST00000415600 WNT7AO00755 349 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 RPA1P27694 616 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 MBTD1Q05BQ5 628 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 CAPSQ13938 189 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 PPFIBP1Q86W92 1011 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 RNF135Q8IUD6 432 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 VN1R2Q8NFZ6 395 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 NECTIN4Q96NY8 510 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 ZBP1Q9H171 429 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 FAN1Q9Y2M0 1017 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 IRAK3Q9Y616 596 aa22.65■■□□□ 1.22
PTPRU-203ENST00000415600 ARID2Q68CP9 1835 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 ARHGEF35A5YM69 484 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 LRRIQ4A6NIV6 560 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 MEIS3P2A8K0S8 358 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 SPATA31C1P0DKV0 1188 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 CTSAP10619 480 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 GLRA2P23416 452 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 ITIH3Q06033 890 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 KCNC3Q14003 757 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 CBX2Q14781 532 aaPredicted RBP22.64■■□□□ 1.22
PTPRU-203ENST00000415600 HERC4Q5GLZ8 1057 aaPredicted RBP22.64■■□□□ 1.22
PTPRU-203ENST00000415600 UBXN11Q5T124 520 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 ASAP3Q8TDY4 903 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 SUSD6Q92537 303 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 CHAMP1Q96JM3 812 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 PRIMPOLQ96LW4 560 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 EMILIN2Q9BXX0 1053 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 C2orf40Q9H1Z8 148 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 SSX2IPQ9Y2D8 614 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 IPPQ9Y573 584 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 HCFC2Q9Y5Z7 792 aa22.64■■□□□ 1.22
PTPRU-203ENST00000415600 MYH15Q9Y2K3 1946 aa22.64■■□□□ 1.21
PTPRU-203ENST00000415600 KLHL40Q2TBA0 621 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 FAM122AQ96E09 287 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 C11orf16Q9NQ32 467 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 PRMT7Q9NVM4 692 aaPredicted RBP22.63■■□□□ 1.21
PTPRU-203ENST00000415600 GIT1Q9Y2X7 761 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 NR2E1Q9Y466 385 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 LOC730098B7Z3J9 87 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 CLASP2O75122 1294 aaKnown RBP22.63■■□□□ 1.21
PTPRU-203ENST00000415600 SLC11A1P49279 550 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 PPP2R5AQ15172 486 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 TMEM132AQ24JP5 1023 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 SLC27A1Q6PCB7 646 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 CPB2Q96IY4 423 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 RPGRIP1Q96KN7 1286 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 DNAJB4Q9UDY4 337 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 MUTYHQ9UIF7 546 aa22.63■■□□□ 1.21
PTPRU-203ENST00000415600 SPDYE4A6NLX3 237 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 LAD1O00515 517 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 PRPF40AO75400 957 aaKnown RBP22.62■■□□□ 1.21
PTPRU-203ENST00000415600 MED24O75448 989 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 POMCP01189 267 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 ARF4P18085 180 aaPredicted RBP22.62■■□□□ 1.21
PTPRU-203ENST00000415600 FXR2P51116 673 aaKnown RBP eCLIP22.62■■□□□ 1.21
PTPRU-203ENST00000415600 RBM10P98175 930 aaKnown RBP22.62■■□□□ 1.21
PTPRU-203ENST00000415600 ELMSAN1Q6PJG2 1045 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 MAEAQ7L5Y9 396 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 ZNF280BQ86YH2 543 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 SMG8Q8ND04 991 aaKnown RBP22.62■■□□□ 1.21
PTPRU-203ENST00000415600 RIPOR3Q96MK2 946 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 S1PR5Q9H228 398 aa22.62■■□□□ 1.21
PTPRU-203ENST00000415600 ARL5CA6NH57 179 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 U2AF2P26368 475 aaKnown RBP eCLIP22.61■■□□□ 1.211e-6■■■□□ 16.3
PTPRU-203ENST00000415600 CCT6AP40227 531 aaKnown RBP22.61■■□□□ 1.21
PTPRU-203ENST00000415600 POTEGQ6S5H5 508 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 PADI6Q6TGC4 694 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 TMEM173Q86WV6 379 aaPredicted RBP22.61■■□□□ 1.21
PTPRU-203ENST00000415600 EIF2AQ9BY44 585 aaKnown RBP22.61■■□□□ 1.21
PTPRU-203ENST00000415600 ADAM7Q9H2U9 754 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 MRPL17Q9NRX2 175 aaKnown RBP22.61■■□□□ 1.21
PTPRU-203ENST00000415600 LRWD1Q9UFC0 647 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 ZMYM2Q9UBW7 1377 aa22.61■■□□□ 1.21
PTPRU-203ENST00000415600 INPPL1O15357 1258 aa22.6■■□□□ 1.21
PTPRU-203ENST00000415600 MTHFRP42898 656 aa22.6■■□□□ 1.21
PTPRU-203ENST00000415600 PDIA5Q14554 519 aa22.6■■□□□ 1.21
PTPRU-203ENST00000415600 MAPK6Q16659 721 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms