RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ASRGL1Q7L266 308 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ADGRF4Q8IZF3 695 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ATXN2LQ8WWM7 1075 aaKnown RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 PGM2Q96G03 612 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ZNF333Q96JL9 665 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 DDX25Q9UHL0 483 aaKnown RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 CCDC188H7C350 402 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 SORBS3O60504 671 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ATP5DP30049 168 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 MMP13P45452 471 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 KIF11P52732 1056 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 SULT2A1Q06520 285 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 ADCY1Q08828 1119 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 NCSTNQ92542 709 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 AKT1S1Q96B36 256 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 IFT43Q96FT9 208 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 TLR10Q9BXR5 811 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
SIK3-203ENST00000415541 NKX1-2Q9UD57 310 aaPredicted RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 R3HDM2Q9Y2K5 976 aaKnown RBP8.38□□□□□ -1.07
SIK3-203ENST00000415541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
SIK3-203ENST00000415541 PAPPAQ13219 1627 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PEX11AO75192 247 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 RCAN1P53805 252 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ADARP55265 1226 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 OCRLQ01968 901 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 DPYDQ12882 1025 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 P3H1Q32P28 736 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 OLFML2BQ68BL8 750 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 INPP5DQ92835 1189 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 NACA2Q9H009 215 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 CCPG1Q9ULG6 757 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 FAM205AQ6ZU69 1335 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 A0A1W2PQJ5 194 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 BIRC5O15392 142 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ITGA2BP08514 1039 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 CCNB1P14635 433 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 SERPINB3P29508 390 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 STAT2P52630 851 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 RHBDL3P58872 404 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PHEXP78562 749 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PDE1BQ01064 536 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 CXCL9Q07325 125 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 RPS6KA1Q15418 735 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 QRICH1Q2TAL8 776 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 LIN52Q52LA3 116 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ZNF658Q5TYW1 1059 aaPredicted RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 SYDE2Q5VT97 1194 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 TMEM110Q86TL2 294 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 SULF1Q8IWU6 871 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 BARHL2Q9NY43 387 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ZNF70Q9UC06 446 aaPredicted RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 CNOT7Q9UIV1 285 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 SPEF2Q9C093 1822 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 CNTNAP5Q8WYK1 1306 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PASKQ96RG2 1323 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 HNRNPCL1O60812 293 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 ASLP04424 464 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 TRAPPC10P48553 1259 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 TMEM62Q0P6H9 643 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 UAP1Q16222 522 aaPredicted RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 HSP90AA5PQ58FG0 334 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 HERC4Q5GLZ8 1057 aaPredicted RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 DCAF15Q66K64 600 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 APOBEC3HQ6NTF7 200 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 NANOGNBQ7Z5D8 188 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PHLDB2Q86SQ0 1253 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 CCNJLQ8IV13 435 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 USP38Q8NB14 1042 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 NEK9Q8TD19 979 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 UCMAQ8WVF2 138 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 TMEM237Q96Q45 408 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 NMRK1Q9NWW6 199 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ZNF711Q9Y462 761 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 ATRNO75882 1429 aa8.37□□□□□ -1.07
SIK3-203ENST00000415541 PDS5AQ29RF7 1337 aaKnown RBP8.37□□□□□ -1.07
SIK3-203ENST00000415541 NHSL1Q5SYE7 1610 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 P4HA2O15460 535 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 MAP3K13O43283 966 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
SIK3-203ENST00000415541 GFPT2O94808 682 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 HARSP12081 509 aaKnown RBP8.36□□□□□ -1.07
SIK3-203ENST00000415541 RNASE9P60153 205 aaKnown RBP8.36□□□□□ -1.07
SIK3-203ENST00000415541 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 SPP2Q13103 211 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 DACT2Q5SW24 774 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 SNX30Q5VWJ9 437 aa8.36□□□□□ -1.07
SIK3-203ENST00000415541 NELFCDQ8IXH7 590 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms