RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 IFT74Q96LB3 600 aa21.89■■□□□ 1.1
AP1S3-205ENST00000415298 SART1O43290 800 aaKnown RBP21.89■■□□□ 1.09
AP1S3-205ENST00000415298 CELF2O95319 508 aaKnown RBP21.89■■□□□ 1.09
AP1S3-205ENST00000415298 TMOD1P28289 359 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 SLC1A4P43007 532 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 MTMR2Q13614 643 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 NR1I3Q14994 352 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 CST9Q5W186 159 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.89■■□□□ 1.09
AP1S3-205ENST00000415298 SLC39A3Q9BRY0 314 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 SLC7A5P2Q9GIP4 190 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 MRPL46Q9H2W6 279 aaKnown RBP21.89■■□□□ 1.09
AP1S3-205ENST00000415298 ECT2Q9H8V3 914 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 OTOFQ9HC10 1997 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 MKS1Q9NXB0 559 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 STIM2Q9P246 746 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 USH1CQ9Y6N9 552 aa21.89■■□□□ 1.09
AP1S3-205ENST00000415298 ASAP2O43150 1006 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 CASP14P31944 242 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 ZNF543Q08ER8 600 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 CCDC153Q494R4 210 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 OTUD7BQ6GQQ9 843 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 MAP3K14Q99558 947 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 CGREF1Q99674 301 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 DKK3Q9UBP4 350 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 STK38LQ9Y2H1 464 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 MAGEA13PA6NCF6 341 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 MFAP3LO75121 409 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 LRRC49Q8IUZ0 686 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 HNRNPABQ99729 332 aaKnown RBP21.88■■□□□ 1.09
AP1S3-205ENST00000415298 TBCCD1Q9NVR7 557 aa21.88■■□□□ 1.09
AP1S3-205ENST00000415298 NKX1-2Q9UD57 310 aaPredicted RBP21.88■■□□□ 1.09
AP1S3-205ENST00000415298 HALP42357 657 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 ADARP55265 1226 aaKnown RBP21.87■■□□□ 1.09
AP1S3-205ENST00000415298 NOL9Q5SY16 702 aaKnown RBP21.87■■□□□ 1.09
AP1S3-205ENST00000415298 WDR78Q5VTH9 848 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 OLFML2BQ68BL8 750 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 GMCL1P1Q8NEA9 526 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 RAB17Q9H0T7 212 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 GUCA1BQ9UMX6 200 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 CSADQ9Y600 493 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 ZNF18P17022 549 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 ENDOUP21128 410 aaKnown RBP21.87■■□□□ 1.09
AP1S3-205ENST00000415298 SSRP1Q08945 709 aaKnown RBP21.87■■□□□ 1.09
AP1S3-205ENST00000415298 PPP2R5BQ15173 497 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 ANKRD13AQ8IZ07 590 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 ZNF280CQ8ND82 737 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 GDAP1Q8TB36 358 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 IQCDQ96DY2 449 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 CCDC28BQ9BUN5 200 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 CNTNAP5Q8WYK1 1306 aa21.87■■□□□ 1.09
AP1S3-205ENST00000415298 GSTT2P0CG29 244 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 GSTT2BP0CG30 244 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 PPP2R2AP63151 447 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 FAM83BQ5T0W9 1011 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 TUBGCP5Q96RT8 1024 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 EMILIN3Q9NT22 766 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 USP17L10C9JJH3 530 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 HSPA8P11142 646 aaKnown RBP21.86■■□□□ 1.09
AP1S3-205ENST00000415298 PYGMP11217 842 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 DAB2IPQ5VWQ8 1189 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 C3orf62Q6ZUJ4 267 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 PIGWQ7Z7B1 504 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 CNGA4Q8IV77 575 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 PDCD7Q8N8D1 485 aaKnown RBP21.86■■□□□ 1.09
AP1S3-205ENST00000415298 RBBP8NLQ8NC74 664 aaPredicted RBP21.86■■□□□ 1.09
AP1S3-205ENST00000415298 ASAP3Q8TDY4 903 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 IFT81Q8WYA0 676 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 ZNF711Q9Y462 761 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 AFG3L2Q9Y4W6 797 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 HEY1Q9Y5J3 304 aa21.86■■□□□ 1.09
AP1S3-205ENST00000415298 PHIPQ8WWQ0 1821 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 STK32AQ8WU08 396 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 OTUD5Q96G74 571 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 GINM1Q9NU53 330 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 PAPPA2Q9BXP8 1791 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 GCOM1H8Y6P7 765 aaPredicted RBP21.85■■□□□ 1.09
AP1S3-205ENST00000415298 PRPF3O43395 683 aaKnown RBP21.85■■□□□ 1.09
AP1S3-205ENST00000415298 TACC1O75410 805 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 MYZAPP0CAP1 466 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 CYP4A11Q02928 519 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 BIRC3Q13489 604 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 LDLRAD1Q5T700 205 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 ZNF572Q7Z3I7 529 aaPredicted RBP21.85■■□□□ 1.09
AP1S3-205ENST00000415298 HAUS4Q9H6D7 363 aa21.85■■□□□ 1.09
AP1S3-205ENST00000415298 MGEA5O60502 916 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 TJP3O95049 919 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 TPBGLP0DKB5 382 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 BMP3P12645 472 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 S100A1P23297 94 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 HMGCS2P54868 508 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 BACE1P56817 501 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 SNAP25P60880 206 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 ASPRV1Q53RT3 343 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 CPLX3Q8WVH0 158 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 SHISA4Q96DD7 197 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 XPO6Q96QU8 1125 aaKnown RBP21.84■■□□□ 1.09
AP1S3-205ENST00000415298 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 KIAA1683Q9H0B3 1180 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 GBA2Q9HCG7 927 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms