RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 RGPD2P0DJD1 1756 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 ACEP12821 1306 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 USP54Q70EL1 1684 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 NRAPQ86VF7 1730 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 NWD2Q9ULI1 1742 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 PLSCR1O15162 318 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 MSX2P35548 267 aaPredicted RBP5.97□□□□□ -1.45
PTPRK-209ENST00000415046 FNTBP49356 437 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 PTH1RQ03431 593 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
PTPRK-209ENST00000415046 MEX3CQ5U5Q3 659 aaKnown RBP5.97□□□□□ -1.45
PTPRK-209ENST00000415046 LRRC59Q96AG4 307 aaKnown RBP5.97□□□□□ -1.45
PTPRK-209ENST00000415046 TESK2Q96S53 571 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 FAM184BQ9ULE4 1060 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 VWA7Q9Y334 891 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 COL14A1Q05707 1796 aaKnown RBP5.97□□□□□ -1.45
PTPRK-209ENST00000415046 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
PTPRK-209ENST00000415046 POLR3AO14802 1390 aaPredicted RBP5.96□□□□□ -1.45
PTPRK-209ENST00000415046 PLD2O14939 933 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 TMF1P82094 1093 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 GRM7Q14831 915 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 ARHGAP44Q17R89 818 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 ADGRE4PQ86SQ3 457 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 C1orf210Q8IVY1 113 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 SHCBP1Q8NEM2 672 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 IL17DQ8TAD2 202 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 CACTINQ8WUQ7 758 aaKnown RBP5.96□□□□□ -1.46
PTPRK-209ENST00000415046 TLR9Q9NR96 1032 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 ING1Q9UK53 422 aaPredicted RBP5.96□□□□□ -1.46
PTPRK-209ENST00000415046 CTDP1Q9Y5B0 961 aaPredicted RBP5.96□□□□□ -1.46
PTPRK-209ENST00000415046 WNK3Q9BYP7 1800 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 USP6P35125 1406 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 SPATA31A3Q5VYP0 1347 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 CD163L1Q9NR16 1453 aa5.96□□□□□ -1.46
PTPRK-209ENST00000415046 SBNO1A3KN83 1393 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 ARHGEF10O15013 1369 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 KTN1Q86UP2 1357 aaKnown RBP5.95□□□□□ -1.46
PTPRK-209ENST00000415046 ZNF202O95125 648 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 ZCCHC8Q6NZY4 707 aaKnown RBP5.95□□□□□ -1.46
PTPRK-209ENST00000415046 LILRB2Q8N423 598 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 LPPQ93052 612 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 E2F7Q96AV8 911 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 SLITRK6Q9H5Y7 841 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 AGO3Q9H9G7 860 aaKnown RBP5.95□□□□□ -1.46
PTPRK-209ENST00000415046 SPATA31A6Q5VVP1 1343 aa5.95□□□□□ -1.46
PTPRK-209ENST00000415046 A0A1W2PP64 1363 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 COL18A1P39060 1754 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 B4E1Z4 1266 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 M0R2C6 588 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 NARSO43776 548 aaKnown RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 GLRX3O76003 335 aaKnown RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 PRLP01236 227 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 SESN2P58004 480 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 DGCR2P98153 550 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 ABHD18Q0P651 414 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 RIN1Q13671 783 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 KLHDC10Q6PID8 442 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 HDGFL2Q7Z4V5 671 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 DDX53Q86TM3 631 aaKnown RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 CHST14Q8NCH0 376 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 RABGGTAQ92696 567 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 ERCC4Q92889 916 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 CSRNP2Q9H175 543 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 OSBPL2Q9H1P3 480 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 SLC12A5Q9H2X9 1139 aa5.94□□□□□ -1.46
PTPRK-209ENST00000415046 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
PTPRK-209ENST00000415046 CPSF1Q10570 1443 aaKnown RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 VIRMAQ69YN4 1812 aaKnown RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 C1SP09871 688 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 HIBADHP31937 336 aaKnown RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 IGFALSP35858 605 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 HHEXQ03014 270 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 ROM1Q03395 351 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 ADAM15Q13444 863 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 FHL2Q14192 279 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 LSM12Q3MHD2 195 aaKnown RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 FNDC3BQ53EP0 1204 aaKnown RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 D2HGDHQ8N465 521 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 AMER2Q8N7J2 671 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 OR5AN1Q8NGI8 311 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 ZNF703Q9H7S9 590 aaPredicted RBP5.93□□□□□ -1.46
PTPRK-209ENST00000415046 TERF2IPQ9NYB0 399 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 SAMD15Q9P1V8 674 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 LMO7Q8WWI1 1683 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 SLIT3O75094 1523 aa5.93□□□□□ -1.46
PTPRK-209ENST00000415046 EDC4Q6P2E9 1401 aaKnown RBP5.92□□□□□ -1.46
PTPRK-209ENST00000415046 DVL2O14641 736 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 KRT37O76014 449 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 RGS3P49796 1198 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 ADCY7P51828 1080 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 KIF11P52732 1056 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 SLC6A3Q01959 620 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 GFM2Q969S9 779 aaKnown RBP5.92□□□□□ -1.46
PTPRK-209ENST00000415046 SLC7A6OSQ96CW6 309 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-209ENST00000415046 TMEM176AQ96HP8 235 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 MENTQ9BUN1 341 aa5.92□□□□□ -1.46
PTPRK-209ENST00000415046 ACSS2Q9NR19 701 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms