RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RHPN2P1A8MT19 583 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 M0R3H8 397 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 NCAM2O15394 837 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TLR5O60602 858 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PCDH8O95206 1070 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CPP00450 1065 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CD4P01730 458 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TNFSF4P23510 183 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PHKA1P46020 1223 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRR20EP86478 221 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRR20CP86479 221 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRR20DP86480 221 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRR20BP86481 221 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRR20AP86496 221 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 OCRLQ01968 901 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 UVSSAQ2YD98 709 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PGS1Q32NB8 556 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 RSRC2Q7L4I2 434 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 SAPCD2Q86UD0 394 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 RHOT1Q8IXI2 618 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 FAM26EQ8N5C1 309 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TTC17Q96AE7 1141 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SKA1Q96BD8 255 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 RCC1LQ96I51 464 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 MDFIQ99750 246 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 ISCA1Q9BUE6 129 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 BOCQ9BWV1 1114 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.01□□□□□ -1.93
MCF2-204ENST00000414978 MYLK2Q9H1R3 596 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 MRGBPQ9NV56 204 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TCFL5Q9UL49 500 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 FHOD1Q9Y613 1164 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CGNL1Q0VF96 1302 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 FAM47E-STBD1D6RA91 191 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 H3BS24 57 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 MBD4O95243 580 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 GALNSP34059 522 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SEMA5AQ13591 1074 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 IL10RAQ13651 578 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 GTF2H3Q13889 308 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 LBRQ14739 615 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 SEC23AQ15436 765 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TESK1Q15569 626 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SMAD1Q15797 465 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 C3orf36Q3SXR2 165 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 FAM209BQ5JX69 171 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 ZNF362Q5T0B9 420 aaPredicted RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 CCDC30Q5VVM6 783 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 KIAA1211Q6ZU35 1233 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 NEK10Q6ZWH5 1172 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PTF1AQ7RTS3 328 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 DAAM2Q86T65 1068 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 ARHGEF25Q86VW2 580 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TEX19Q8NA77 164 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 APPL2Q8NEU8 664 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 DDX11Q96FC9 970 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 HHIPL1Q96JK4 782 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 NUP88Q99567 741 aaPredicted RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 SELENOOQ9BVL4 669 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CELF4Q9BZC1 486 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 RNF208Q9H0X6 261 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CSRNP2Q9H175 543 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CDIP1Q9H305 208 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PRDM12Q9H4Q4 367 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 ARFGAP3Q9NP61 516 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 GTF2A1LQ9UNN4 478 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 JAG2Q9Y219 1238 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TBC1D30Q9Y2I9 924 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SF3B6Q9Y3B4 125 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 CCDC154A6NI56 674 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SHISA8B8ZZ34 492 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 J3KRW8 73 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 CHL1O00533 1208 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TRIM38O00635 465 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 LRIG2O94898 1065 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 PGM3O95394 542 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SYN1P17600 705 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 UBA7P41226 1012 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 BPIFB3P59826 476 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 ALDH6A1Q02252 535 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 KIZQ2M2Z5 673 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 DNAJB8Q8NHS0 232 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 EDARADDQ8WWZ3 215 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 TCTN2Q96GX1 697 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 Q96M66 194 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 RIPOR3Q96MK2 946 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SMURF1Q9HCE7 757 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 UCKL1Q9NWZ5 548 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 LIMCH1Q9UPQ0 1083 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 LRCH1Q9Y2L9 728 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 SPEF1Q9Y4P9 236 aa3.01□□□□□ -1.93
MCF2-204ENST00000414978 MYH14Q7Z406 1995 aaKnown RBP3.01□□□□□ -1.93
MCF2-204ENST00000414978 MYO1BO43795 1136 aa3□□□□□ -1.93
MCF2-204ENST00000414978 ORC4O43929 436 aa3□□□□□ -1.93
MCF2-204ENST00000414978 ULK1O75385 1050 aa3□□□□□ -1.93
MCF2-204ENST00000414978 FAM87AP0C7U9 286 aa3□□□□□ -1.93
MCF2-204ENST00000414978 LSSP48449 732 aa3□□□□□ -1.93
MCF2-204ENST00000414978 LGALS4P56470 323 aa3□□□□□ -1.93
MCF2-204ENST00000414978 SESN3P58005 492 aa3□□□□□ -1.93
MCF2-204ENST00000414978 MAP2K1Q02750 393 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms