RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ERMNQ8TAM6 284 aa15.69■□□□□ 0.1
SEMA3F-202ENST00000413852 FAXDC2Q96IV6 333 aa15.69■□□□□ 0.1
SEMA3F-202ENST00000413852 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
SEMA3F-202ENST00000413852 GAKO14976 1311 aa15.69■□□□□ 0.1
SEMA3F-202ENST00000413852 CYP26A1O43174 497 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 SPOPO43791 374 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 CFBP00751 764 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 ZSWIM1Q9BR11 485 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 HEMGNQ9BXL5 484 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 O00370 1275 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 TP73O15350 636 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 GHRP10912 638 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 NQO1P15559 274 aaKnown RBP15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 NPEPPSP55786 919 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 MGAT5Q09328 741 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 C3orf20Q8ND61 904 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 FIZ1Q96SL8 496 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 CBWD1Q9BRT8 395 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 ANKRD62A6NC57 917 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 ASAP2O43150 1006 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 PEX19P40855 299 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 GPATCH4Q5T3I0 446 aaKnown RBP15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 NOP9Q86U38 636 aaKnown RBP15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 PLEKHO2Q8TD55 490 aa15.68■□□□□ 0.1
SEMA3F-202ENST00000413852 COILP38432 576 aaPredicted RBP15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 PEX5P50542 639 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 C6orf118Q5T5N4 469 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 NAIF1Q69YI7 327 aaPredicted RBP15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 CGB2Q6NT52 195 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 PPP1R18Q6NYC8 613 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 CENPTQ96BT3 561 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 KLHL29Q96CT2 875 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 ATP6V0A4Q9HBG4 840 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 TTC7AQ9ULT0 858 aaPredicted RBP15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 AFF2P51816 1311 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 GJC1P36383 396 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 MAP2K1Q02750 393 aaPredicted RBP15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 C1orf186Q6ZWK4 172 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 ANKLE1Q8NAG6 615 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 TMEM237Q96Q45 408 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 ASIC3Q9UHC3 531 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 FRMD4BQ9Y2L6 1034 aa15.67■□□□□ 0.1
SEMA3F-202ENST00000413852 CYP3A7-CYP3A51PA0A087WV96 503 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 FAM187AA6NFU0 413 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SLC16A3O15427 465 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SPAG7O75391 227 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 EYA4O95677 639 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 CYP3A7P24462 503 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 RBM5P52756 815 aaKnown RBP eCLIP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 RNF207Q6ZRF8 634 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SRRM1Q8IYB3 904 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 RASAL2Q9UJF2 1139 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 INTUQ9ULD6 942 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 F5H6K3 240 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 AGTP01019 485 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 CYP3A4P08684 503 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SLC8A1P32418 973 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 KRT17Q04695 432 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 MTM1Q13496 603 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 DHX34Q14147 1143 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 SIX1Q15475 284 aaPredicted RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 ZNF720Q7Z2F6 126 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 NUP85Q9BW27 656 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 PARVGQ9HBI0 331 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 R3HDM2Q9Y2K5 976 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 USP15Q9Y4E8 981 aaPredicted RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 FBXO11Q86XK2 927 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 PPM1KQ8N3J5 372 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 CCDC127Q96BQ5 260 aa15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
SEMA3F-202ENST00000413852 COL16A1Q07092 1604 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 CTNNA2P26232 953 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 CCNHP51946 323 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 ADCY2Q08462 1091 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 BMT2Q1RMZ1 405 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 SEL1L2Q5TEA6 688 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 ARMC9Q7Z3E5 817 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 COL23A1Q86Y22 540 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 SLC13A5Q86YT5 568 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 TOPORSQ9NS56 1045 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 NKX1-2Q9UD57 310 aaPredicted RBP15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 FRMPD4Q14CM0 1322 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 BFSP1Q12934 665 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 ITIH4Q14624 930 aa15.65■□□□□ 0.1
SEMA3F-202ENST00000413852 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms