RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 REEP2Q9BRK0 252 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 NTPCRQ9BSD7 190 aaKnown RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 TRIM6Q9C030 488 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 PDZD7Q9H5P4 517 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 TMEM134Q9H6X4 195 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 ALG13Q9NP73 1137 aaKnown RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 KMT5AQ9NQR1 393 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 ODF2LQ9ULJ1 636 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 INPP5FQ9Y2H2 1132 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 HES2Q9Y543 173 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 TRANK1O15050 2925 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
TMEM248-202ENST00000413593 N4BP3O15049 544 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 INPPL1O15357 1258 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 SLC16A4O15374 487 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 CUTAO60888 179 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 FGF18O76093 207 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 PBX3P40426 434 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 AFF1P51825 1210 aaKnown RBP11.09□□□□□ -0.63
TMEM248-202ENST00000413593 ZNF131P52739 623 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 CAMK1Q14012 370 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 GIT2Q14161 759 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 TMEM132AQ24JP5 1023 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC73Q6ZRK6 1079 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 HACE1Q8IYU2 909 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 TMEM161BQ8NDZ6 487 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 URGCPQ8TCY9 931 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 KCNG4Q8TDN1 519 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 PANK2Q9BZ23 570 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 UBN1Q9NPG3 1134 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 PRDM6Q9NQX0 595 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
TMEM248-202ENST00000413593 KCNG1Q9UIX4 513 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 PRRC2BQ5JSZ5 2229 aaKnown RBP11.09□□□□□ -0.63
TMEM248-202ENST00000413593 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
TMEM248-202ENST00000413593 ARL5CA6NH57 179 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 B4GALT3O60512 393 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 FAM13AO94988 1023 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 KRT18P05783 430 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 MAPTP10636 758 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 AKAP5P24588 427 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 DNAJB1P25685 340 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PPM1AP35813 382 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 MLH1P40692 756 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 STAT6P42226 847 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ME1P48163 572 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 SMTNP53814 917 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 NCKAP1LP55160 1127 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PLCB3Q01970 1234 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 UBE3AQ05086 875 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ZNF280BQ86YH2 543 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PDILTQ8N807 584 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 SLC17A8Q8NDX2 589 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 POF1BQ8WVV4 589 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 KCNN1Q92952 543 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 GAD1Q99259 594 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 TARS2Q9BW92 718 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
TMEM248-202ENST00000413593 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PARVGQ9HBI0 331 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 KANSL3Q9P2N6 904 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 PCDHA7Q9UN72 937 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 COL6A3P12111 3177 aa11.08□□□□□ -0.64
TMEM248-202ENST00000413593 ZMYM2Q9UBW7 1377 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 H0YCG3 227 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 DDHD2O94830 711 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 CSPG5O95196 566 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 POMCP01189 267 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 IRS1P35568 1242 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 ALDH7A1P49419 539 aaKnown RBP11.07□□□□□ -0.64
TMEM248-202ENST00000413593 SCNN1GP51170 649 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 BCAR1P56945 870 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
TMEM248-202ENST00000413593 E2F4Q16254 413 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 DCAF4L1Q3SXM0 396 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 SV2BQ7L1I2 683 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 HAUS6Q7Z4H7 955 aa11.07□□□□□ -0.64
TMEM248-202ENST00000413593 MYCT1Q8N699 235 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms