RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ZNF292O60281 2723 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 CLUHO75153 1309 aa13.6□□□□□ -0.23
LIMS2-210ENST00000413578 GAS2O43903 313 aaKnown RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 TSPAN1O60635 241 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 C1RP00736 705 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 PCBP1Q15365 356 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■■■ 32.7
LIMS2-210ENST00000413578 AMHR2Q16671 573 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 IFNLR1Q8IU57 520 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 GPR65Q8IYL9 337 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 ADSSL1Q8N142 457 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 CNNM3Q8NE01 707 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 RSAD2Q8WXG1 361 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 MYADMQ96S97 322 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 UBN1Q9NPG3 1134 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 XPNPEP1Q9NQW7 623 aa13.59□□□□□ -0.23
LIMS2-210ENST00000413578 PRG3Q9Y2Y8 225 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-210ENST00000413578 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 F8W810 466 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 C2CD2LO14523 706 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 TBX3O15119 743 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 ASAP2O43150 1006 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 DKC1O60832 514 aaKnown RBP eCLIP13.58□□□□□ -0.24
LIMS2-210ENST00000413578 RFPL2O75678 378 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 GLUD1P00367 558 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 ADH1AP07327 375 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 SRGAP2CP0DJJ0 459 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
LIMS2-210ENST00000413578 GLUD2P49448 558 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 AK2P54819 239 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 EMC2Q15006 297 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 EPHA7Q15375 998 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 SLC44A3Q8N4M1 653 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 RNF149Q8NC42 400 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 GSTCDQ8NEC7 633 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 CCDC51Q96ER9 411 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-210ENST00000413578 GAD1Q99259 594 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 LXNQ9BS40 222 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 RGL1Q9NZL6 768 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 FBXL21Q9UKT6 434 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.24
LIMS2-210ENST00000413578 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 ZBTB39O15060 712 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 ITGA4P13612 1032 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
LIMS2-210ENST00000413578 AXLP30530 894 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 MLH1P40692 756 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 OR1G1P47890 313 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 SCNN1GP51170 649 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 PTENP60484 403 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 POU5F1BQ06416 359 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 LILRA6Q6PI73 481 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 STAMQ92783 540 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-210ENST00000413578 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 DPP7Q9UHL4 492 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 KCNJ14Q9UNX9 436 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 HES2Q9Y543 173 aa13.57□□□□□ -0.24
LIMS2-210ENST00000413578 C2orf16Q68DN1 1984 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 ANHXE9PGG2 379 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 CPLX1O14810 134 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
LIMS2-210ENST00000413578 TGM5O43548 720 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 CFHP08603 1231 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 SRFP11831 508 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 GBP2P32456 591 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-210ENST00000413578 ID4P47928 161 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 SMG7Q92540 1137 aaKnown RBP13.56□□□□□ -0.24
LIMS2-210ENST00000413578 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 CSRNP2Q9H175 543 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 ZDHHC7Q9NXF8 308 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 GIT1Q9Y2X7 761 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 GPR179Q6PRD1 2367 aa13.56□□□□□ -0.24
LIMS2-210ENST00000413578 OTOGLQ3ZCN5 2332 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 ERLIN2O94905 339 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 SLITRK3O94933 977 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 REC8O95072 547 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 LYPLA2O95372 231 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms