RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 PDCD11Q14690 1871 aaKnown RBP12.72□□□□□ -0.37
HDAC9-206ENST00000413380 INO80B-WBP1J3KQ70 363 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 ABLIM1O14639 778 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 TSPAN1O60635 241 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 CLTBP09497 229 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 GARTP22102 1010 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 SFPQP23246 707 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC9-206ENST00000413380 AXLP30530 894 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 PMS1P54277 932 aaKnown RBP12.72□□□□□ -0.37
HDAC9-206ENST00000413380 MYL5Q02045 173 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 TMEM62Q0P6H9 643 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 NCAPHQ15003 741 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 LRRC55Q6ZSA7 311 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 TSHZ1Q6ZSZ6 1077 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 HS2ST1Q7LGA3 356 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 FAM228AQ86W67 206 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 NELFCDQ8IXH7 590 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 ACO2Q99798 780 aaKnown RBP12.72□□□□□ -0.37
HDAC9-206ENST00000413380 DUSP9Q99956 384 aaKnown RBP12.72□□□□□ -0.37
HDAC9-206ENST00000413380 AGPAT3Q9NRZ7 376 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 AGPAT5Q9NUQ2 364 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 TNFSF13BQ9Y275 285 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 TRIP11Q15643 1979 aa12.72□□□□□ -0.37
HDAC9-206ENST00000413380 A0A1B0GUA9 196 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 HNRNPDLO14979 420 aaKnown RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 TOM1L1O75674 476 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 CTSHP09668 335 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 ADSSP30520 456 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 MCCD1P59942 119 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 LPIN1Q14693 890 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 SPATA1Q5VX52 437 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 ANKRD40Q6AI12 368 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 DHX40Q8IX18 779 aaKnown RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 CCDC51Q96ER9 411 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 SCLT1Q96NL6 688 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 TSG101Q99816 390 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 CBX8Q9HC52 389 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 ATP11BQ9Y2G3 1177 aa12.71□□□□□ -0.37
HDAC9-206ENST00000413380 NOC2LQ9Y3T9 749 aaKnown RBP12.71□□□□□ -0.37
HDAC9-206ENST00000413380 TRIM49BA6NDI0 452 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 STK25O00506 426 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 MAPK13O15264 365 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-206ENST00000413380 FAM189A1O60320 539 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 CXCL10P02778 98 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 ARF4P18085 180 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-206ENST00000413380 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
HDAC9-206ENST00000413380 MCL1Q07820 350 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 GPNMBQ14956 572 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 IER5LQ5T953 404 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 SLFN12LQ6IEE8 588 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 PPP1R16BQ96T49 567 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 MKNK1Q9BUB5 465 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 TARS2Q9BW92 718 aaKnown RBP12.7□□□□□ -0.38
HDAC9-206ENST00000413380 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 HSD3B7Q9H2F3 369 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 HIPK3Q9H422 1215 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 AGO3Q9H9G7 860 aaKnown RBP12.7□□□□□ -0.38
HDAC9-206ENST00000413380 CHST12Q9NRB3 414 aa12.7□□□□□ -0.38
HDAC9-206ENST00000413380 TTC3P53804 2025 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 A0A0B4J269 797 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 SMTNL1A8MU46 457 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 N4BP3O15049 544 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 GPR182O15218 404 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 B4GALT5O43286 388 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 CSDE1O75534 798 aaKnown RBP12.69□□□□□ -0.38
HDAC9-206ENST00000413380 ERLIN2O94905 339 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 NR3C1P04150 777 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 ZNF18P17022 549 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 RFC2P35250 354 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 LIG4P49917 911 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
HDAC9-206ENST00000413380 POU5F1Q01860 360 aaKnown RBP12.69□□□□□ -0.38
HDAC9-206ENST00000413380 ENPEPQ07075 957 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
HDAC9-206ENST00000413380 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 NOTUMQ6P988 496 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 MPZL3Q6UWV2 235 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms