RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SOGA3Q5TF21 947 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 TIGD7Q6NT04 549 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 DOK3Q7L591 496 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 OTOP1Q7RTM1 612 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 XYLT1Q86Y38 959 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 C9orf106Q8NAJ2 232 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 GSTCDQ8NEC7 633 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 ASB10Q8WXI3 467 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 NOL10Q9BSC4 688 aaKnown RBP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 HIRIP3Q9BW71 556 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 TEX101Q9BY14 249 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 COL3A1P02461 1466 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 STK10O94804 968 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 MATN4O95460 622 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 ITGAMP11215 1152 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 RGS19P49795 217 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 NHLH1Q02575 133 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 SRSF4Q08170 494 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 RASGRF1Q13972 1273 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 MYBPC3Q14896 1274 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZNF174Q15697 407 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 PDCD4Q53EL6 469 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 SCLYQ96I15 445 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 HIST1H2AHQ96KK5 128 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 DNAJC2Q99543 621 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 HIST1H2AJQ99878 128 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 INTS7Q9NVH2 962 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 POGKQ9P215 609 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 USP36Q9P275 1121 aaKnown RBP3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 MAP3K2Q9Y2U5 619 aa3.62□□□□□ -1.83
HMGB3P2-201ENST00000411913 TCRBV16S1A1N1A0A5B0 115 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 H7C1D1 291 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 DVL2O14641 736 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 SPDEFO95238 335 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 EGR2P11161 476 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 KCNA6P17658 529 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 DUSP2Q05923 314 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 RESTQ13127 1097 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 EPHA7Q15375 998 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 GPR162Q16538 588 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 PIK3R6Q5UE93 754 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 ABHD17CQ6PCB6 329 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 OR10H5Q8NGA6 315 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 ANKS1AQ92625 1134 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 PITHD1Q9GZP4 211 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P2-201ENST00000411913 LRRC3CA6NJW4 275 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 OPHN1O60890 802 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 PRPF6O94906 941 aaKnown RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZFPL1O95159 310 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 RBP3P10745 1247 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 PTX3P26022 381 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 MGAT1P26572 445 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ADCY1Q08828 1119 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 LONRF2Q1L5Z9 754 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZC3H12BQ5HYM0 836 aaKnown RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 EFCAB12Q6NXP0 572 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 DDX53Q86TM3 631 aaKnown RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 CKAP2LQ8IYA6 745 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 UNC5BQ8IZJ1 945 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 C7orf31Q8N865 590 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 KIAA1958Q8N8K9 716 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 PIK3C3Q8NEB9 887 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZNF778Q96MU6 729 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ADAM2Q99965 735 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 SOX7Q9BT81 388 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 MYL10Q9BUA6 226 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 ALG13Q9NP73 1137 aaKnown RBP3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 SEMA4GQ9NTN9 838 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 MSRB2Q9Y3D2 182 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 FPGT-TNNI3KV9GXZ4 949 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 MAST3O60307 1309 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 KDM2BQ8NHM5 1336 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 SALL3Q9BXA9 1300 aa3.6□□□□□ -1.83
HMGB3P2-201ENST00000411913 M0R2C6 588 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 FOSP01100 380 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 HOXB6P17509 224 aaKnown RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 FDXRP22570 491 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 RARRES1P49788 294 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 SIM1P81133 766 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 CD69Q07108 199 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZNF169Q14929 603 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 TRIM61Q5EBN2 209 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 KIAA1841Q6NSI8 718 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 DRICH1Q6PGQ1 229 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 UNQ6494/PRO21346Q6UXR6 183 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 GPRIN1Q7Z2K8 1008 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 KANSL1Q7Z3B3 1105 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 NOP9Q86U38 636 aaKnown RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 PHYKPLQ8IUZ5 450 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 SYT12Q8IV01 421 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 C1QTNF7Q9BXJ2 289 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 CCDC113Q9H0I3 377 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 KMT5AQ9NQR1 393 aa3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 USP15Q9Y4E8 981 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P2-201ENST00000411913 PTPDC1A2A3K4 754 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 CDKL5O76039 1030 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 PCDH8O95206 1070 aa3.58□□□□□ -1.84
HMGB3P2-201ENST00000411913 CLEC2LP0C7M8 214 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms