RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 IFNL3Q8IZI9 196 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 KLHL36Q8N4N3 616 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 DTX3Q8N9I9 347 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC112Q8NEF3 446 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 ST13P5Q8NFI4 369 aaPredicted RBP4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 UHMK1Q8TAS1 419 aaKnown RBP4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 MAP4K1Q92918 833 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 TTC12Q9H892 705 aaPredicted RBP4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 BARX1Q9HBU1 254 aaPredicted RBP4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 DLL4Q9NR61 685 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 TBX22Q9Y458 520 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 TELO2Q9Y4R8 837 aa4.08□□□□□ -1.76
RNU6-55P-201ENST00000411092 RGPD8O14715 1765 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 KIF1AQ12756 1690 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 HEG1Q9ULI3 1381 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC66A2RUB6 948 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 VPS37CA5D8V6 355 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 GOLGA6L19H0YKK7 550 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 MATN3O15232 486 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 GPR42O15529 346 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 DDX58O95786 925 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 SOD2P04179 222 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CKMP06732 381 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 RPS6KB1P23443 525 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 HOXC9P31274 260 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 KCNJ4P48050 445 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 GLRBP48167 497 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 GPR85P60893 370 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NCBP1Q09161 790 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 IFRD2Q12894 506 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 RAB33AQ14088 237 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ICAM4Q14773 271 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 SMAD2Q15796 467 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ME3Q16798 604 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 SKIDA1Q1XH10 827 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ANO6Q4KMQ2 910 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 AMOTQ4VCS5 1084 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 TSHZ3Q63HK5 1081 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CREB3L3Q68CJ9 461 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 STYK1Q6J9G0 422 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZSCAN25Q6NSZ9 544 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 GIMAP6Q6P9H5 292 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CWC27Q6UX04 472 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NOL8Q76FK4 1167 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC83Q8IWF9 413 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 KRT222Q8N1A0 295 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 LRRC47Q8N1G4 583 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC150Q8NCX0 1101 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF397Q8NF99 534 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 LEO1Q8WVC0 666 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 DVL3Q92997 716 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ERO1AQ96HE7 468 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF396Q96N95 335 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 PTPN18Q99952 460 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZFYVE21Q9BQ24 234 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 TRIM5Q9C035 493 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 IPPKQ9H8X2 491 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 JADE2Q9NQC1 790 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 DBF4Q9UBU7 674 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 DSEQ9UL01 958 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NUB1Q9Y5A7 615 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 RBM8AQ9Y5S9 174 aaKnown RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 EID1Q9Y6B2 187 aa4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 MORC2Q9Y6X9 1032 aaPredicted RBP4.07□□□□□ -1.76
RNU6-55P-201ENST00000411092 NPHP4O75161 1426 aaPredicted RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 ADCY9O60503 1353 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 FAM47E-STBD1D6RA91 191 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 C1QTNF3-AMACRE9PGA6 284 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 KLHL18O94889 574 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 FBXO21O94952 628 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 TPM1P09493 284 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 TNNT1P13805 278 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 PTGS1P23219 599 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 EPHB4P54760 987 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 EIF4A1P60842 406 aaKnown RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 TPM4P67936 248 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 PFKPQ01813 784 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 HABP4Q5JVS0 413 aaKnown RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 CD276Q5ZPR3 534 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 KSR2Q6VAB6 950 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC73Q6ZRK6 1079 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 KCTD1Q719H9 257 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 CCDC186Q7Z3E2 898 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 CIR1Q86X95 450 aaPredicted RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 DRC7Q8IY82 874 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 CEP57L1Q8IYX8 460 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 FBXL16Q8N461 479 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 NGDNQ8NEJ9 315 aaKnown RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 IL17REQ8NFR9 667 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 LINS1Q8NG48 757 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 KIF18AQ8NI77 898 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 GTF3C6Q969F1 213 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 ZNF830Q96NB3 372 aaPredicted RBP4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 BPIFA3Q9BQP9 254 aa4.06□□□□□ -1.76
RNU6-55P-201ENST00000411092 TRIM55Q9BYV6 548 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms