RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NPTXRO95502 500 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 EDN1P05305 212 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 NAMPTP43490 491 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 KCNC3Q14003 757 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 FAM187BQ17R55 369 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 SLC27A1Q6PCB7 646 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 ZBTB8OSQ8IWT0 167 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 MRPL43Q8N983 215 aaKnown RBP19.58■□□□□ 0.72
LSM5-204ENST00000409909 KHSRPQ92945 711 aaKnown RBP eCLIP19.58■□□□□ 0.72
LSM5-204ENST00000409909 TMEM169Q96HH4 297 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 ZFP42Q96MM3 310 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 PNMA5Q96PV4 448 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 GAD1Q99259 594 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 KIFC3Q9BVG8 833 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 APOL6Q9BWW8 343 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 VN1R3Q9BXE9 311 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 CCDC113Q9H0I3 377 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 UBN1Q9NPG3 1134 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 PRMT7Q9NVM4 692 aaPredicted RBP19.58■□□□□ 0.72
LSM5-204ENST00000409909 MIOSQ9NXC5 875 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 KANSL3Q9P2N6 904 aa19.58■□□□□ 0.72
LSM5-204ENST00000409909 MLH1P40692 756 aa19.57■□□□□ 0.72
LSM5-204ENST00000409909 SMAD2Q15796 467 aaKnown RBP19.57■□□□□ 0.72
LSM5-204ENST00000409909 ARL6IP4Q66PJ3 421 aaKnown RBP19.57■□□□□ 0.72
LSM5-204ENST00000409909 DDX53Q86TM3 631 aaKnown RBP19.57■□□□□ 0.72
LSM5-204ENST00000409909 VPS52Q8N1B4 723 aa19.57■□□□□ 0.72
LSM5-204ENST00000409909 KIFAP3Q92845 792 aa19.57■□□□□ 0.72
LSM5-204ENST00000409909 CDCA3Q99618 268 aaPredicted RBP19.57■□□□□ 0.72
LSM5-204ENST00000409909 RUSC1Q9BVN2 902 aa19.57■□□□□ 0.72
LSM5-204ENST00000409909 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
LSM5-204ENST00000409909 C2orf40Q9H1Z8 148 aa19.57■□□□□ 0.72
LSM5-204ENST00000409909 C2orf71A6NGG8 1288 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 AKAP5P24588 427 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 COASYQ13057 564 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 SMAD4Q13485 552 aaKnown RBP19.56■□□□□ 0.72
LSM5-204ENST00000409909 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
LSM5-204ENST00000409909 PPP2R5AQ15172 486 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 ZRSR1Q15695 479 aaKnown RBP19.56■□□□□ 0.72
LSM5-204ENST00000409909 HYIQ5T013 277 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 DAW1Q8N136 415 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 GSTCDQ8NEC7 633 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 DEPTORQ8TB45 409 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 AUTS2Q8WXX7 1259 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 ZBP1Q9H171 429 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 PDZD7Q9H5P4 517 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 FAM50BQ9Y247 325 aa19.56■□□□□ 0.72
LSM5-204ENST00000409909 CARNS1A5YM72 827 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 ACKR2O00590 384 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 NRP1O14786 923 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 CXCL14O95715 111 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 ALDH2P05091 517 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 PRKCBP05771 671 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 LIG1P18858 919 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 SCNN1GP51170 649 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 ZP2Q05996 745 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 PRPF4BQ13523 1007 aaKnown RBP19.55■□□□□ 0.72
LSM5-204ENST00000409909 MAPK6Q16659 721 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 RINT1Q6NUQ1 792 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 TMEM184AQ6ZMB5 413 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 COLGALT2Q8IYK4 626 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 GJD3Q8N144 294 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 SMRP1Q8NCR6 262 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 FAM193BQ96PV7 902 aaPredicted RBP19.55■□□□□ 0.72
LSM5-204ENST00000409909 PLIN2Q99541 437 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 TMEM175Q9BSA9 504 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 FAN1Q9Y2M0 1017 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 GIT1Q9Y2X7 761 aa19.55■□□□□ 0.72
LSM5-204ENST00000409909 VPS37CA5D8V6 355 aaPredicted RBP19.54■□□□□ 0.72
LSM5-204ENST00000409909 HIP1RO75146 1068 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 DSC1Q08554 894 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 MAPK7Q13164 816 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 NT5DC1Q5TFE4 455 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 LLGL2Q6P1M3 1020 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 EPHX3Q9H6B9 360 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 KLK14Q9P0G3 267 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 PRKAG3Q9UGI9 489 aa19.54■□□□□ 0.72
LSM5-204ENST00000409909 FSD2A1L4K1 749 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 C19orf67A6NJJ6 358 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 N4BP3O15049 544 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 CLASP2O75122 1294 aaKnown RBP19.53■□□□□ 0.72
LSM5-204ENST00000409909 CTSAP10619 480 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 PDCP20941 246 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 SYT1P21579 422 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 SSTR3P32745 418 aaPredicted RBP19.53■□□□□ 0.72
LSM5-204ENST00000409909 NPTX2P47972 431 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 EFNA5P52803 228 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 PEX3P56589 373 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 GRIN1Q05586 938 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 EEF1DP3Q658K8 133 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 ADHFE1Q8IWW8 467 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 HACE1Q8IYU2 909 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 MARCH5Q9NX47 278 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 PARP2Q9UGN5 583 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 IRAK3Q9Y616 596 aa19.53■□□□□ 0.72
LSM5-204ENST00000409909 TDRD15B5MCY1 1934 aaKnown RBP19.53■□□□□ 0.72
LSM5-204ENST00000409909 SFI1A8K8P3 1242 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms