RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SCTRP47872 440 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MASP1P48740 699 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 VAV2P52735 878 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 GFPT1Q06210 699 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ZNF568Q3ZCX4 644 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 RFWD3Q6PCD5 774 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 GJB7Q6PEY0 223 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 STAG2Q8N3U4 1231 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MNS1Q8NEH6 495 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TTLL11Q8NHH1 800 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 RAPGEF5Q92565 580 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 SYAP1Q96A49 352 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PABPC5Q96DU9 382 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ZBTB3Q9H5J0 574 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ASXL3Q9C0F0 2248 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PLCG2P16885 1265 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DRD4P21917 467 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 BRD2P25440 801 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 LMNB2Q03252 620 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ANKRD20A2Q5SQ80 823 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ANKRD20A1Q5TYW2 823 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ANKRD20A3Q5VUR7 823 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TTC27Q6P3X3 843 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 LBX2Q6XYB7 198 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MLKLQ8NB16 471 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PTPRN2Q92932 1015 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 FAM118BQ9BPY3 351 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TAS2R14Q9NYV8 317 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ADAMTS1Q9UHI8 967 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 GOLGA8BA8MQT2 603 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 RFXAPO00287 272 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SMNDC1O75940 238 aaKnown RBP eCLIP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 GNA14O95837 355 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 RAG1P15918 1043 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 HOXA7P31268 230 aaPredicted RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 EMP3P54852 163 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 POSTNQ15063 836 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ENOX2Q16206 610 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 PTGISQ16647 500 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ANKRD40Q6AI12 368 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 TBC1D1Q86TI0 1168 aaPredicted RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SCYL3Q8IZE3 742 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ANKRD20A12PQ8NF67 263 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CELF1Q92879 486 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ASIC4Q96FT7 647 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SH2D3AQ9BRG2 576 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 AP1M1Q9BXS5 423 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 C20orf27Q9GZN8 174 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CENPHQ9H3R5 247 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CABP5Q9NP86 173 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 INIPQ9NRY2 104 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 WASF2Q9Y6W5 498 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 FLT1P17948 1338 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 MAGEA13PA6NCF6 341 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 GSG1L2A8MUP6 293 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 DAPK3O43293 454 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 TRAPPC3O43617 180 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SLCO1A2P46721 670 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 PSMD2Q13200 908 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 PTGDRQ13258 359 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 MEA1Q16626 185 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ANKDD1AQ495B1 522 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ZDHHC24Q6UX98 284 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 RIPOR1Q6ZS17 1223 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 JAKMIP2Q96AA8 810 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 PAGE5Q96GU1 130 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 VEZTQ9HBM0 779 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 FAM207AQ9NSI2 230 aaPredicted RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SNX12Q9UMY4 172 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 DENND4AQ7Z401 1863 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 WNK2Q9Y3S1 2297 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CLRN2A0PK11 232 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 E5RJQ4 531 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 GFPT2O94808 682 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 YEATS4O95619 227 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CCND3P30281 292 aaPredicted RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 ARRB2P32121 409 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 RPS6KA3P51812 740 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 WDR4P57081 412 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 IGBP1P78318 339 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 NNTQ13423 1086 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CCDC85BQ15834 202 aaPredicted RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 KHDC1Q4VXA5 237 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CREBRFQ8IUR6 639 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 UBALD2Q8IYN6 164 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 MSL3Q8N5Y2 521 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 TTC8Q8TAM2 541 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 FAM110BQ8TC76 370 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 PBXIP1Q96AQ6 731 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 CCDC43Q96MW1 224 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 MYD88Q99836 296 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 WDR83Q9BRX9 315 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 EPB41L5Q9HCM4 733 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 A1CFQ9NQ94 594 aaKnown RBP3.41□□□□□ -1.86
RGPD3-202ENST00000409886 IRAK4Q9NWZ3 460 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 SIK3Q9Y2K2 1263 aa3.41□□□□□ -1.86
RGPD3-202ENST00000409886 DAGLAQ9Y4D2 1042 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms