RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 VAMP7P51809 220 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 RUFY4Q6ZNE9 571 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 INTS8Q75QN2 995 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 KIAA0319LQ8IZA0 1049 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 MRPL4Q9BYD3 311 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 IFT122Q9HBG6 1241 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 SIP14410 1827 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 TREHO43280 583 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 NRDCO43847 1150 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 ACTN1P12814 892 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 GARTP22102 1010 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 SCP2P22307 547 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 PTENP60484 403 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 MBTD1Q05BQ5 628 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 POP1Q99575 1024 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 MTG1Q9BT17 334 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 NUP58Q9BVL2 599 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 ABHD10Q9NUJ1 306 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CAPN11Q9UMQ6 739 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
CHMP3-204ENST00000409727 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 C17orf102A2RUQ5 167 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 CLDN3O15551 220 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 GNRH1P01148 92 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 PIGRP01833 764 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 INHAP05111 366 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 SLC9A1P19634 815 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 GCLMP48507 274 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 FMO5P49326 533 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
CHMP3-204ENST00000409727 KCNA10Q16322 511 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 ZBTB41Q5SVQ8 909 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 DNAJB3Q8WWF6 145 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
CHMP3-204ENST00000409727 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
CHMP3-204ENST00000409727 EXTL3O43909 919 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ZEB2O60315 1214 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ASGR1P07306 291 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 FGFR4P22455 802 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 GPC3P51654 580 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 MYL7Q01449 175 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 CACNA2D4Q7Z3S7 1137 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 TMEM139Q8IV31 216 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 KIAA1524Q8TCG1 905 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 KCNN1Q92952 543 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 TMX1Q9H3N1 280 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 A0A0B4J269 797 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 SOWAHDA6NJG2 315 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ACKR2O00590 384 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 KPNA6O60684 536 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 TOM1L1O75674 476 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 PON1P27169 355 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 POLR2FP61218 127 aaKnown RBP13.55□□□□□ -0.24
CHMP3-204ENST00000409727 CYP24A1Q07973 514 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 PPP3CAQ08209 521 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 MAP3K21Q5TCX8 1036 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ATF7IP2Q5U623 682 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 ZPBP2Q6X784 338 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 FAM84AQ96KN4 292 aa13.55□□□□□ -0.24
CHMP3-204ENST00000409727 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms