RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 LINC01599Q8WXQ3 324 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 PIBF1Q8WXW3 757 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 PLEKHA5Q9HAU0 1116 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 HOMER2Q9NSB8 354 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 AIPL1Q9NZN9 384 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 PTPRJQ12913 1337 aa5.34□□□□□ -1.55
R3HDM1-203ENST00000409606 TCRBV5S1A1TA0A578 114 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 H3BRB1 525 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 AKAP3O75969 853 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 COL9A1P20849 921 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 CDH5P33151 784 aaPredicted RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 RFC2P35250 354 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 GRM5P41594 1212 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 KCNA1Q09470 495 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 AAK1Q2M2I8 961 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 DEFB123Q8N688 67 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 USP38Q8NB14 1042 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 SP7Q8TDD2 431 aaPredicted RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 SMCR8Q8TEV9 937 aaPredicted RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 NELFBQ8WX92 580 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 ZNF516Q92618 1163 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 ZNF689Q96CS4 500 aaPredicted RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 PANX2Q96RD6 677 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 DNAJC25Q9H1X3 360 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 TUT1Q9H6E5 874 aaKnown RBP5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 KIAA1586Q9HCI6 787 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 NRBP2Q9NSY0 501 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 CAPN11Q9UMQ6 739 aa5.34□□□□□ -1.56
R3HDM1-203ENST00000409606 PDE4DIPQ5VU43 2346 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 A0A1W2PQ45 241 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 A0A1W2PQY0 241 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TTC26A0AVF1 554 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TMEM150BA6NC51 233 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ANKRD63C9JTQ0 380 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 INSRRP14616 1297 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 DARSP14868 501 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ATF7P17544 494 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ACO1P21399 889 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PTGS1P23219 599 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 LRPAP1P30533 357 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 FKBP3Q00688 224 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 CEBPZQ03701 1054 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 DHX8Q14562 1220 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TCTN1Q2MV58 587 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 MFSD14CQ5VZR4 134 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PLA2G4FQ68DD2 849 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 GDF6Q6KF10 455 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TAF2Q6P1X5 1199 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 WDR59Q6PJI9 974 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PAGR1Q9BTK6 254 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 XYLT2Q9H1B5 865 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 BLZF1Q9H2G9 400 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PTCH2Q9Y6C5 1203 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 C2orf16Q68DN1 1984 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 CEP350Q5VT06 3117 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 EXTL3O43909 919 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 SGPL1O95470 568 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 VNN1O95497 513 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 INHAP05111 366 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ZNF165P49910 485 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ACLYP53396 1101 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 CYP24A1Q07973 514 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 SMG8Q8ND04 991 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 OR6J1Q8NGC5 347 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PIGOQ8TEQ8 1089 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 DDX1Q92499 740 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PPP1R10Q96QC0 940 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 NAT10Q9H0A0 1025 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 RGS18Q9NS28 235 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 DOCK4Q8N1I0 1966 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 SCN8AQ9UQD0 1980 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TNPO2O14787 897 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 GRK4P32298 578 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 AP3M2P53677 418 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 SPAG1Q07617 926 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 INCA1Q0VD86 236 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 PLEKHG4Q58EX7 1191 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 FOXD4L5Q5VV16 416 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 BRSK2Q8IWQ3 736 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 FOXD4L4Q8WXT5 416 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 ACCSQ96QU6 501 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 IRF2BPLQ9H1B7 796 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 POLR3FQ9H1D9 316 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 FANCLQ9NW38 375 aa5.33□□□□□ -1.56
R3HDM1-203ENST00000409606 RNF225M0QZC1 329 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 PJA2O43164 708 aa5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 TBC1D4O60343 1298 aa5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 NR3C1P04150 777 aa5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 GYPCP04921 128 aa5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 MYCLP12524 364 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 PRKAR2AP13861 404 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 NPEPPSP55786 919 aa5.32□□□□□ -1.56
R3HDM1-203ENST00000409606 CCDC173Q0VFZ6 552 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms