RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PPP1R37O75864 691 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 AMHP03971 560 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 MYBP10242 640 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 DARSP14868 501 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.492e-6■■■■□ 23.9
TSPAN4-208ENST00000409531 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 EPM2AIP1Q7L775 607 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 GUF1Q8N442 669 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 ZNF507Q8TCN5 953 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 PRIMPOLQ96LW4 560 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 ACCSQ96QU6 501 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 STRA6Q9BX79 667 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 TMEM206Q9H813 350 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 TBX20Q9UMR3 447 aa18.13■□□□□ 0.49
TSPAN4-208ENST00000409531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 ENPP3O14638 875 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 ERLIN2O94905 339 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 GJB5O95377 273 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 PRKCBP05771 671 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 MYOGP15173 224 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 CD52P31358 61 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 CASP5P51878 434 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 MBTD1Q05BQ5 628 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 TYRO3Q06418 890 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 NCBP1Q09161 790 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 BMT2Q1RMZ1 405 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 ZC2HC1CQ53FD0 456 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 CT47A1Q5JQC4 288 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 MAP4K3Q8IVH8 894 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 FTHL17Q9BXU8 183 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 NKX2-4Q9H2Z4 354 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 PADI3Q9ULW8 664 aa18.12■□□□□ 0.49
TSPAN4-208ENST00000409531 ACKR2O00590 384 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 PSMA7O14818 248 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 TLL1O43897 1013 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 BMP6P22004 513 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 PRCPP42785 496 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 TMCO2Q7Z6W1 182 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 SMYD4Q8IYR2 804 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 SYCP3Q8IZU3 236 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 SCFD1Q8WVM8 642 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 TOP1MTQ969P6 601 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 RAD9AQ99638 391 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 COL25A1Q9BXS0 654 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 FZD8Q9H461 694 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 STXBP5LQ9Y2K9 1186 aa18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-208ENST00000409531 GPR182O15218 404 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 PRPF6O94906 941 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 NFX1Q12986 1120 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 PAK2Q13177 524 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 KNOP1Q1ED39 458 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 CATSPER4Q7RTX7 472 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 GLIS3Q8NEA6 775 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 TMEM40Q8WWA1 233 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 BICD1Q96G01 975 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 DHTKD1Q96HY7 919 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 GUCD1Q96NT3 240 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 MRPL4Q9BYD3 311 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 NAT10Q9H0A0 1025 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 MINDY3Q9H8M7 445 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
TSPAN4-208ENST00000409531 CAVIN2O95810 425 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 CA3P07451 260 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 AXLP30530 894 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 PRPF4BQ13523 1007 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 GRIN2CQ14957 1233 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 TMEM132AQ24JP5 1023 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 DPCR1Q3MIW9 517 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 PPP2R2DQ66LE6 453 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 FAM117BQ6P1L5 589 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 ZPBP2Q6X784 338 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 TAS1R3Q7RTX0 852 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 RTN4RL1Q86UN2 441 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 CDX2Q99626 313 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 GBP3Q9H0R5 595 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 ERVK-5Q9HDB9 667 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 INSL6Q9Y581 213 aa18.09■□□□□ 0.49
TSPAN4-208ENST00000409531 CNTNAP2Q9UHC6 1331 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 BICDL2A1A5D9 508 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 HNRNPDLO14979 420 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 CSDE1O75534 798 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 PIGRP01833 764 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 LIG4P49917 911 aa18.08■□□□□ 0.49
TSPAN4-208ENST00000409531 LRSAM1Q6UWE0 723 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms