RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 LRRC55Q6ZSA7 311 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 THNSL1Q8IYQ7 743 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 TCHHQ07283 1943 aa12.88□□□□□ -0.35
AC007249.1-201ENST00000404616 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 B4GALT5O43286 388 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 FGF18O76093 207 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 BRD1O95696 1058 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 ZNF131P52739 623 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 STRN3Q13033 797 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 MCM6Q14566 821 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 BMS1Q14692 1282 aaKnown RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 DCAF4L1Q3SXM0 396 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 SPECC1Q5M775 1068 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 LPPQ93052 612 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 TMEM175Q9BSA9 504 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 MRPL4Q9BYD3 311 aaKnown RBP12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 CUEDC2Q9H467 287 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 TBC1D13Q9NVG8 400 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 TNFSF13BQ9Y275 285 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
AC007249.1-201ENST00000404616 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 FAM13AO94988 1023 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 NPTXRO95502 500 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 ALDH2P05091 517 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 BCAR1P56945 870 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 GIT2Q14161 759 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 POF1BQ8WVV4 589 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 MRPS27Q92552 414 aaKnown RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 LRRC27Q9C0I9 530 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 PDZD7Q9H5P4 517 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 CITO14578 2027 aa12.86□□□□□ -0.35
AC007249.1-201ENST00000404616 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 ARL5CA6NH57 179 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 MEIS3P2A8K0S8 358 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 SLC16A4O15374 487 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 LIG1P18858 919 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 STAT6P42226 847 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 PKP1Q13835 747 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 LONRF3Q496Y0 759 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 HLA-CQ95604 372 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 GAD1Q99259 594 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 REEP2Q9BRK0 252 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 KIFC3Q9BVG8 833 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 NGRNQ9NPE2 291 aaKnown RBP12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 EYSQ5T1H1 3165 aa12.85□□□□□ -0.35
AC007249.1-201ENST00000404616 NCOR1O75376 2440 aa12.84□□□□□ -0.35
AC007249.1-201ENST00000404616 TRAK2O60296 914 aa12.84□□□□□ -0.35
AC007249.1-201ENST00000404616 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC007249.1-201ENST00000404616 NR1I2O75469 434 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms