RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CNTNAP2Q9UHC6 1331 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 BICDL2A1A5D9 508 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 N4BP3O15049 544 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 TOM1L1O75674 476 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-201ENST00000404210 GARTP22102 1010 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 PROZP22891 400 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 LIG4P49917 911 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 PAK1Q13153 545 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 MYBPC2Q14324 1141 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 NFIL3Q16649 462 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 C12orf56Q8IXR9 622 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 C7orf61Q8IZ16 206 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
LINC00339-201ENST00000404210 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 CCDC51Q96ER9 411 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 SCLYQ96I15 445 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 TSG101Q99816 390 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
LINC00339-201ENST00000404210 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 RWDD2AQ9UIY3 292 aa13.49□□□□□ -0.25
LINC00339-201ENST00000404210 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 CLDN3O15551 220 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 B4GALT5O43286 388 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 DSC3Q14574 896 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 APBB1IPQ7Z5R6 666 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 DBF4BQ8NFT6 615 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 SEPT8Q92599 483 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 CPB2Q96IY4 423 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
LINC00339-201ENST00000404210 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 TMX1Q9H3N1 280 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 USP20Q9Y2K6 914 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 BRCA2P51587 3418 aa13.48□□□□□ -0.25
LINC00339-201ENST00000404210 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 TANC1Q9C0D5 1861 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 ABLIM1O14639 778 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 CLIC2O15247 247 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 LDHAP00338 332 aaKnown RBP13.47□□□□□ -0.25
LINC00339-201ENST00000404210 PFKMP08237 780 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
LINC00339-201ENST00000404210 ADSSP30520 456 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 RGS19P49795 217 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
LINC00339-201ENST00000404210 MCL1Q07820 350 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 MPZL3Q6UWV2 235 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-201ENST00000404210 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
LINC00339-201ENST00000404210 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
LINC00339-201ENST00000404210 A0A0B4J269 797 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 MCF2P10911 925 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 CSF2RAP15509 400 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 ZNF165P49910 485 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 STX17P56962 302 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
LINC00339-201ENST00000404210 PPIGQ13427 754 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00339-201ENST00000404210 ADAM9Q13443 819 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 KYAT1Q16773 422 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 DCAF4L1Q3SXM0 396 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 EEF1DP3Q658K8 133 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 DEFB128Q7Z7B8 93 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.25
LINC00339-201ENST00000404210 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
LINC00339-201ENST00000404210 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 BADQ92934 168 aa13.46□□□□□ -0.25
LINC00339-201ENST00000404210 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms