RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GCDHQ92947 438 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 ADI1Q9BV57 179 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 INTUQ9ULD6 942 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 ARHGAP6O43182 974 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 AKR1B10O60218 316 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 ALDH1A2O94788 518 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 TOX4O94842 621 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 EDNRBP24530 442 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 HGFACQ04756 655 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 SEPT2Q15019 361 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 LCNL1Q6ZST4 164 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 TAS1R1Q7RTX1 841 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 MYO1HQ8N1T3 1032 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 FEZF2Q8TBJ5 459 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 SLC7A6OSQ96CW6 309 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 RPL10LQ96L21 214 aaKnown RBP6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 CSRNP2Q9H175 543 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 ANLNQ9NQW6 1124 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 NR2E1Q9Y466 385 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 DUSP10Q9Y6W6 482 aa6.47□□□□□ -1.37
HMGB3P19-201ENST00000403971 EFCAB5A4FU69 1503 aa6.46□□□□□ -1.37
HMGB3P19-201ENST00000403971 UGGT2Q9NYU1 1516 aa6.46□□□□□ -1.37
HMGB3P19-201ENST00000403971 MATN2O00339 956 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 HTRA2O43464 458 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 CNOT4O95628 575 aaKnown RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 BMP7P18075 431 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 KIR2DL3P43628 341 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 BPIFB4P59827 614 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 KIAA2012Q0VF49 1180 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 MLC1Q15049 377 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 SAMD9Q5K651 1589 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 CEP162Q5TB80 1403 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 Q6ZVL8 140 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 FAM124AQ86V42 546 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 TCEAL8Q8IYN2 117 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 MARCH10Q8NA82 808 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZSCAN18Q8TBC5 510 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 SNX33Q8WV41 574 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 CFHR4Q92496 578 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 GTPBP4Q9BZE4 634 aaKnown RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 C14orf93Q9H972 538 aaKnown RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 RBM12Q9NTZ6 932 aaKnown RBP6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 IPPQ9Y573 584 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC4A7Q9Y6M7 1214 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 SHROOM2Q13796 1616 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 RPTORQ8N122 1335 aa6.46□□□□□ -1.38
HMGB3P19-201ENST00000403971 CLASP1Q7Z460 1538 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 LPOP22079 712 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 ADCY7P51828 1080 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC16A1P53985 500 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 ADAM8P78325 824 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 MEF2AQ02078 507 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 IL10RAQ13651 578 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 SAFB2Q14151 953 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZNF267Q14586 743 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 NXNQ6DKJ4 435 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 EPM2AIP1Q7L775 607 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 SP8Q8IXZ3 490 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 MAGEB6Q8N7X4 407 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 KAT5Q92993 513 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 RAB24Q969Q5 203 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 GPHA2Q96T91 129 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 NUP88Q99567 741 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 PTPN18Q99952 460 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 USP40Q9NVE5 1235 aa6.45□□□□□ -1.38
HMGB3P19-201ENST00000403971 CLIP1P30622 1438 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 ADCY6O43306 1168 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 POU2F2P09086 479 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 ATF3P18847 181 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 CYP2C19P33261 490 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 MGAT2Q10469 447 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 NFYCQ13952 458 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZNF568Q3ZCX4 644 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 IFIT1BQ5T764 474 aaKnown RBP6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 KRT40Q6A162 431 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 BORAQ6PGQ7 559 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 LILRA6Q6PI73 481 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 FBXO18Q8NFZ0 1043 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 TTC8Q8TAM2 541 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 HOXB13Q92826 284 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 LPPQ93052 612 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 CLIP3Q96DZ5 547 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 DPYSL5Q9BPU6 564 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC6A15Q9H2J7 730 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 NCDNQ9UBB6 729 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 SAP30BPQ9UHR5 308 aaKnown RBP6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 SIK3Q9Y2K2 1263 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 PCDHA13Q9Y5I0 950 aa6.44□□□□□ -1.38
HMGB3P19-201ENST00000403971 ARHGAP35Q9NRY4 1499 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 AP1G1O43747 822 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 VSIG10L2P0DP72 767 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms