RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 PIK3CDO00329 1044 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CALCAP01258 141 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 RARRES1P49788 294 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MTMR2Q13614 643 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 TUBB8Q3ZCM7 444 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 WDR44Q5JSH3 913 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CYFIP1Q7L576 1253 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MGARPQ8TDB4 240 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 RIT2Q99578 217 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 TOPORSQ9NS56 1045 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 GABBR1Q9UBS5 961 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 FRMPD4Q14CM0 1322 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 IGSF9BQ9UPX0 1349 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 HGSO14964 777 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 RGS16O15492 202 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 PPP1R37O75864 691 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 PLS3P13797 630 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 COMTP21964 271 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 IFNAR2P48551 515 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 LIG4P49917 911 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 BAATQ14032 418 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 WDR78Q5VTH9 848 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 SWSAP1Q6NVH7 229 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 OTUD6AQ7L8S5 288 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 IQCKQ8N0W5 287 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CRYGNQ8WXF5 182 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 NUP85Q9BW27 656 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 SLITRK6Q9H5Y7 841 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 LRRIQ4A6NIV6 560 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 NEBLO76041 1014 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 MMEP08473 750 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 VIMP08670 466 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 MDH1P40925 334 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 SNRNP35Q16560 246 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 GSTA5Q7RTV2 222 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 SLC47A2Q86VL8 602 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 LRRC57Q8N9N7 239 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ZNF564Q8TBZ8 553 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 SCFD2Q8WU76 684 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 KRT35Q92764 455 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 C18orf8Q96DM3 657 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 NEUROG2Q9H2A3 272 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 RANBP17Q9H2T7 1088 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 KCNK9Q9NPC2 374 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 COL20A1Q9P218 1284 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ANKFY1Q9P2R3 1169 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 FZD1Q9UP38 647 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 A0A087WUV0 522 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 WDR64B1ANS9 1081 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ATP9AO75110 1047 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ICAM1P05362 532 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CNGA1P29973 690 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 MAPK4P31152 587 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CORO7P57737 925 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 PSMC5P62195 406 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CIAPIN1Q6FI81 312 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CCDC137Q6PK04 289 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ZNF572Q7Z3I7 529 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 PASD1Q8IV76 773 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 EFCAB13Q8IY85 973 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 NEK9Q8TD19 979 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 C1orf54Q8WWF1 131 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 AKT1S1Q96B36 256 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 HEMGNQ9BXL5 484 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 RPAP3Q9H6T3 665 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 C1orf112Q9NSG2 853 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 RNF146Q9NTX7 359 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 TBC1D22BQ9NU19 505 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 CNOT8Q9UFF9 292 aaKnown RBP8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ANAPC7Q9UJX3 599 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 INTUQ9ULD6 942 aa8.27□□□□□ -1.09
HDAC9-201ENST00000401921 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
HDAC9-201ENST00000401921 SCP2P22307 547 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 MARCKSL1P49006 195 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 FKBP1AP62942 108 aaKnown RBP8.26□□□□□ -1.09
HDAC9-201ENST00000401921 STRN3Q13033 797 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 KRT39Q6A163 491 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 TADA2BQ86TJ2 420 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 HOOK3Q86VS8 718 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 NLRP14Q86W24 1093 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 MDM1Q8TC05 714 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 SYTL5Q8TDW5 730 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-201ENST00000401921 MRRFQ96E11 262 aaKnown RBP8.26□□□□□ -1.09
HDAC9-201ENST00000401921 CCT8L2Q96SF2 557 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 SLC24A3Q9HC58 644 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 KCND2Q9NZV8 630 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 MYO1FO00160 1098 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 WNT10BO00744 389 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 PLSCR1O15162 318 aa8.26□□□□□ -1.09
HDAC9-201ENST00000401921 CTNND1O60716 968 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms