RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 MMGT1Q8N4V1 131 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 TTC39CQ8N584 583 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 ATL2Q8NHH9 583 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 MS4A14Q96JA4 679 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 INO80Q9ULG1 1556 aaPredicted RBP17.77■□□□□ 0.44
TSC2-204ENST00000401874 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 SAAL1Q96ER3 474 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 C2orf40Q9H1Z8 148 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.44
TSC2-204ENST00000401874 POLD4Q9HCU8 107 aa17.77■□□□□ 0.44
TSC2-204ENST00000401874 AKR1B1P15121 316 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 AP2B1P63010 937 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 TRIML2Q8N7C3 387 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 RAVER2Q9HCJ3 691 aaKnown RBP17.77■□□□□ 0.43
TSC2-204ENST00000401874 UVRAGQ9P2Y5 699 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 HNRNPCL1O60812 293 aaKnown RBP17.77■□□□□ 0.43
TSC2-204ENST00000401874 MARK3P27448 753 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 COPS2P61201 443 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 NAB2Q15742 525 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 PDCD2Q16342 344 aaPredicted RBP17.77■□□□□ 0.43
TSC2-204ENST00000401874 SPATA21Q7Z572 469 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 KLHL8Q9P2G9 620 aaPredicted RBP17.77■□□□□ 0.43
TSC2-204ENST00000401874 APEX2Q9UBZ4 518 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
TSC2-204ENST00000401874 ERCC6L2Q5T890 1561 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 PYGBP11216 843 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 ZSCAN20P17040 1043 aaPredicted RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 ROR1Q01973 937 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 PPM1NQ8N819 430 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 ARL2BPQ9Y2Y0 163 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 TBX3O15119 743 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 FGFR4P22455 802 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 PHKA2P46019 1235 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 OCRLQ01968 901 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 CCDC124Q96CT7 223 aaKnown RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 CCT8L2Q96SF2 557 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 ZNF302Q9NR11 478 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 DCTN4Q9UJW0 460 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 ASAP2O43150 1006 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 KRT10P13645 584 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 SDC4P31431 198 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 PSMC1P62191 440 aaKnown RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 STK4Q13043 487 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 ZNF568Q3ZCX4 644 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 MYLK4Q86YV6 388 aaPredicted RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 CDKL3Q8IVW4 592 aaPredicted RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 SLC35G2Q8TBE7 412 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 MRPL46Q9H2W6 279 aaKnown RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 TRIM10Q9UDY6 481 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 HEY1Q9Y5J3 304 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 UCHL3P15374 230 aa17.76■□□□□ 0.43
TSC2-204ENST00000401874 POLR3FQ9H1D9 316 aaPredicted RBP17.76■□□□□ 0.43
TSC2-204ENST00000401874 SMARCA1P28370 1054 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 GPSM2P81274 684 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 TDRD3Q9H7E2 651 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 SLC9A2Q9UBY0 812 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 CCDC22O60826 627 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 PAPOLAP51003 745 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 RBM43Q6ZSC3 357 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 SCG3Q8WXD2 468 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 RBM12Q9NTZ6 932 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 PPP1R3GB7ZBB8 358 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 KIAA0391O15091 583 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 GALCP54803 685 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 NOP14P78316 857 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 TEDDM1Q5T9Z0 273 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 GIPC2Q8TF65 315 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 DONSONQ9NYP3 566 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 GABBR1Q9UBS5 961 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 SMG5Q9UPR3 1016 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 TAF6LQ9Y6J9 622 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 REXO1L1PQ8IX06 675 aa17.75■□□□□ 0.43
TSC2-204ENST00000401874 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.75■□□□□ 0.43
TSC2-204ENST00000401874 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 MYMKA6NI61 221 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 ECE2O60344 883 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 EEF1B2P24534 225 aaKnown RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 SH2D3CQ8N5H7 860 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 HIPK4Q8NE63 616 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 CXorf38Q8TB03 319 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 M0QYV0 167 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 STXBP3O00186 592 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 NMT1P30419 496 aaKnown RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 ABI1Q8IZP0 508 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms