RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 GBA2Q9HCG7 927 aaPredicted RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 PUF60Q9UHX1 559 aaKnown RBP13.31□□□□□ -0.28
CLIP4-203ENST00000401617 SNX12Q9UMY4 172 aa13.31□□□□□ -0.28
CLIP4-203ENST00000401617 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 EXTL3O43909 919 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 GPC3P51654 580 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CLDN10P78369 228 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 HSP90AA2PQ14568 343 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CCL15Q16663 113 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 TEX35Q5T0J7 233 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 KRT39Q6A163 491 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 ARHGEF19Q8IW93 802 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 ATP8B4Q8TF62 1192 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 PCDHGC5Q9Y5F6 944 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 STRNO43815 780 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 LRRN2O75325 713 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 SLC26A2P50443 739 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 CAPSQ13938 189 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 TTLL4Q14679 1199 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 ARMCX2Q7L311 632 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 USP37Q86T82 979 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 EXOC8Q8IYI6 725 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 LNX1Q8TBB1 728 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 SCFD2Q8WU76 684 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 PSPC1Q8WXF1 523 aaKnown RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 ZNF408Q9H9D4 720 aa13.3□□□□□ -0.28
CLIP4-203ENST00000401617 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-203ENST00000401617 EVPLQ92817 2033 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 ZNF233A6NK53 670 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 K7ERI5 159 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 ADCY3O60266 1144 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 LIG4P49917 911 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 STRN3Q13033 797 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
CLIP4-203ENST00000401617 PLCB4Q15147 1175 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 IER5Q5VY09 327 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 SLFN12LQ6IEE8 588 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 C15orf39Q6ZRI6 1047 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 ZNF572Q7Z3I7 529 aaPredicted RBP13.29□□□□□ -0.28
CLIP4-203ENST00000401617 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 BICD1Q96G01 975 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 RPGRIP1Q96KN7 1286 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 HAPLN2Q9GZV7 340 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 PDGFCQ9NRA1 345 aa13.29□□□□□ -0.28
CLIP4-203ENST00000401617 A0A0A6YYK5 440 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 LRRIQ4A6NIV6 560 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 BUB1O43683 1085 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 SRGAP2O75044 1071 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 ZBTB48P10074 688 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CLCN6P51797 869 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 PSMD6Q15008 389 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CDCA2Q69YH5 1023 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 MAMDC4Q6UXC1 1216 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CREG2Q8IUH2 290 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 GLG1Q92896 1179 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 COPS5Q92905 334 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 SMARCAD1Q9H4L7 1026 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 VTA1Q9NP79 307 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 A0A0B4J269 797 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 TCP1P17987 556 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 ADORA2AP29274 412 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 MAP2K1Q02750 393 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CKAP4Q07065 602 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 ARHGAP1Q07960 439 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 DRP2Q13474 957 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 FAM71AQ8IYT1 594 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 TCP11Q8WWU5 503 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 PRPF31Q8WWY3 499 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 MMS19Q96T76 1030 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 POP1Q99575 1024 aaKnown RBP13.28□□□□□ -0.28
CLIP4-203ENST00000401617 FAM213AQ9BRX8 229 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
CLIP4-203ENST00000401617 CCDC113Q9H0I3 377 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms