RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SRRM1Q8IYB3 904 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 KIAA2013Q8IYS2 634 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 XPO4Q9C0E2 1151 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 TRAF3IP3Q9Y228 551 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 RFX3P48380 749 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 FAF2Q96CS3 445 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 OTUB1Q96FW1 271 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 DYRK3O43781 588 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 CLTAP09496 248 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 MYL4P12829 197 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ANKRD20A4Q4UJ75 823 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 TAF1BQ53T94 588 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ANKRD20A8PQ5CZ79 823 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 CEP78Q5JTW2 689 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ANKRD20A2Q5SQ80 823 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ANKRD20A1Q5TYW2 823 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 RD3Q7Z3Z2 195 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ZNF438Q7Z4V0 828 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 OR8K1Q8NGG5 319 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 KIF17Q9P2E2 1029 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 PRAMEP78395 509 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 RALGDSQ12967 914 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 USP44Q9H0E7 712 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 CPA4Q9UI42 421 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 STAP1Q9ULZ2 295 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 PRG3Q9Y2Y8 225 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 CAPN7Q9Y6W3 813 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 PDCLQ13371 301 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 AP1ARQ63HQ0 302 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ZNF507Q8TCN5 953 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 Q9H521 79 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 GCFC2P16383 781 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 GRAMD4Q6IC98 578 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 CES5AQ6NT32 575 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 RNF40O75150 1001 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 STARD3Q14849 445 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 ME3Q16798 604 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 NOSTRINQ8IVI9 506 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 USP6NLQ92738 828 aa11.63□□□□□ -0.55
CACNA1C-216ENST00000399638 PIK3R2O00459 728 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 GUCA1AP43080 201 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 MSH2P43246 934 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 MXI1P50539 228 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 APBA1Q02410 837 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 DGKDQ16760 1214 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 NLRP10Q86W26 655 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 NDOR1Q9UHB4 597 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 COL15A1P39059 1388 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 TSC22D2O75157 780 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 SLC20A2Q08357 652 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 DNAJC3Q13217 504 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PTPAQ15257 358 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 KRT77Q7Z794 578 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ANKRD13AQ8IZ07 590 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 USP28Q96RU2 1077 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 CKBP12277 381 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PFKFB1P16118 471 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ADD1P35611 737 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ADCK5Q3MIX3 580 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 EFHC2Q5JST6 749 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 LEMD2Q8NC56 503 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 CNGB3Q9NQW8 809 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PRKAB2O43741 272 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 GFPT2O94808 682 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PCDH8O95206 1070 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 AMHP03971 560 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 RALBP11234 206 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 PRELPP51888 382 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 LCORLQ8N3X6 602 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 EEF2KMTQ96G04 330 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 BCL2L14Q9BZR8 327 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 GCNT4Q9P109 453 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 EPS15L1Q9UBC2 864 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 SUN2Q9UH99 717 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 ATP7BP35670 1465 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 UBE4BO95155 1302 aa11.62□□□□□ -0.55
CACNA1C-216ENST00000399638 H0Y626 953 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms