RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TOGARAM2Q6ZUX3 1019 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 TMC7Q7Z402 723 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 ZNF560Q96MR9 790 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 KIF2CQ99661 725 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 TUBB6Q9BUF5 446 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 PREX2Q70Z35 1606 aa11.65□□□□□ -0.55
CACNA1C-210ENST00000399606 AFPP02771 609 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 URODP06132 367 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 KRT7P08729 469 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 CCDC90BQ9GZT6 254 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 CAPN1P07384 714 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 SLC9A1P19634 815 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 HIPK4Q8NE63 616 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 P4HA2O15460 535 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 THG1LQ9NWX6 298 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PRR23D1E9PI22 279 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PRR23D2P0DMB1 279 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 MCF2P10911 925 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 KLRC2P26717 231 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 SRRM1Q8IYB3 904 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 LZTS3O60299 673 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 APBA1Q02410 837 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 KIAA2013Q8IYS2 634 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 TRAF3IP3Q9Y228 551 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 RFX3P48380 749 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 FAF2Q96CS3 445 aa11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 OTUB1Q96FW1 271 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 INTS9Q9NV88 658 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-210ENST00000399606 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 DYRK3O43781 588 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 MYL4P12829 197 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 TMED2Q15363 201 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 TAF1BQ53T94 588 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 CEP78Q5JTW2 689 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 RD3Q7Z3Z2 195 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 ZNF438Q7Z4V0 828 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 C10orf53Q8N6V4 93 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 KIF17Q9P2E2 1029 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 PRAMEP78395 509 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 RALGDSQ12967 914 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 CPA4Q9UI42 421 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 STAP1Q9ULZ2 295 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 PRG3Q9Y2Y8 225 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 ATP5JP18859 108 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 OCA2Q04671 838 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 PDCLQ13371 301 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 ZNF507Q8TCN5 953 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 GCFC2P16383 781 aaKnown RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 CES5AQ6NT32 575 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 ST13P4Q8IZP2 240 aaPredicted RBP11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 MSH2P43246 934 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 STARD3Q14849 445 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 USP6NLQ92738 828 aa11.63□□□□□ -0.55
CACNA1C-210ENST00000399606 PIK3R2O00459 728 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 GUCA1AP43080 201 aaPredicted RBP11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 MXI1P50539 228 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 DGKDQ16760 1214 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 NLRP10Q86W26 655 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 NDOR1Q9UHB4 597 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 COL15A1P39059 1388 aa11.62□□□□□ -0.55
CACNA1C-210ENST00000399606 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms