RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 UNC5CLQ8IV45 518 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 EIF2S1P05198 315 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 FYNP06241 537 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 ADORA1P30542 326 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 CCT3P49368 545 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 ZNF568Q3ZCX4 644 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 CATSPER1Q8NEC5 780 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 MAST3O60307 1309 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 TEX28O15482 410 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 ELMSAN1Q6PJG2 1045 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 C10orf53Q8N6V4 93 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 GPBP1L1Q9HC44 474 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 HSPBP1Q9NZL4 362 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 H0YCG3 227 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 FGGP02679 453 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 TPP2P29144 1249 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 PHKA1P46020 1223 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 PPP3CCP48454 512 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 RSBN1Q5VWQ0 802 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 P3H2Q8IVL5 708 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
CACNA1C-209ENST00000399603 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 POLR2MP0CAP2 368 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 NFKBIAP25963 317 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ARL4CP56559 192 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 NFIL3Q16649 462 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 SYMPKQ92797 1274 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 TINF2Q9BSI4 451 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 REXO4Q9GZR2 422 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 NRBP2Q9NSY0 501 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 BLOC1S6Q9UL45 172 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 MEIS1O00470 390 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ALDH6A1Q02252 535 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 BLIDQ8IZY5 108 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 KRT78Q8N1N4 520 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ATP8A2Q9NTI2 1148 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 OR52Z1P0C646 297 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 GMNCA6NCL1 334 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 FEN1P39748 380 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 NDUFA8P51970 172 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 IPPQ9Y573 584 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 PRDM15P57071 1507 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 MAP3K15Q6ZN16 1313 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 PEX1O43933 1283 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 GGCXP38435 758 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 KLC1Q07866 573 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 CXorf56Q9H5V9 222 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 POLR3EQ9NVU0 708 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 CHRNA3P32297 505 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 KDELC2Q7Z4H8 507 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 GLMNQ92990 594 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 IL1RL2Q9HB29 575 aa13.22□□□□□ -0.29
CACNA1C-209ENST00000399603 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 NLRP1Q9C000 1473 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 TSPAN9O75954 239 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 STX3Q13277 289 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 CUL1Q13616 776 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 KLHL20Q9Y2M5 609 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 COG2Q14746 738 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 ZSWIM7Q19AV6 140 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 LRRC49Q8IUZ0 686 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 OR6P1Q8NGX9 317 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 MYBL1P10243 752 aa13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 EIF4A3P38919 411 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-209ENST00000399603 TFDP1Q14186 410 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms