RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CHURC1Q8WUH1 139 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 JDP2Q8WYK2 163 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 C18orf8Q96DM3 657 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 ZSWIM1Q9BR11 485 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 PABPC3Q9H361 631 aaKnown RBP27.57■■■□□ 2
COL13A1-203ENST00000398969 TMEM206Q9H813 350 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 C5orf60A6NFR6 353 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 P4HA2O15460 535 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 SHBGP04278 402 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 GCLMP48507 274 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 PMS2P54278 862 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 PLTPP55058 493 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 GPC5P78333 572 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 HOOK3Q86VS8 718 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 MXRA8Q9BRK3 442 aa27.57■■■□□ 2
COL13A1-203ENST00000398969 CAND2O75155 1236 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 HSPA6P17066 643 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 ACTN3Q08043 901 aaPredicted RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 C1orf220Q5T0J3 134 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 PRELID2Q8N945 189 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 FBXO25Q8TCJ0 367 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 TMEM174Q8WUU8 243 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 ZBED3Q96IU2 234 aaPredicted RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 CBWD1Q9BRT8 395 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 VCPKMTQ9H867 229 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 CNOT10Q9H9A5 744 aaKnown RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 LARSQ9P2J5 1176 aaKnown RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 TMEM110-MUSTN1A8MSY1 372 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 NFKBIEO00221 500 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 CHRNA3P32297 505 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 GTF2A1P52655 376 aaPredicted RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 ZNF746Q6NUN9 644 aaPredicted RBP27.56■■■□□ 2
COL13A1-203ENST00000398969 GRHL1Q9NZI5 618 aa27.56■■■□□ 2
COL13A1-203ENST00000398969 MAPTP10636 758 aaKnown RBP27.55■■■□□ 2
COL13A1-203ENST00000398969 ITGB5P18084 799 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 ALCAMQ13740 583 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 C12orf56Q8IXR9 622 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 RPS6KC1Q96S38 1066 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 TMEM39BQ9GZU3 492 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 ZBTB21Q9ULJ3 1066 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 BACH1O14867 736 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 CTNNA2P26232 953 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 DRP2Q13474 957 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 MIER3Q7Z3K6 550 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 LDHDQ86WU2 507 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 ACCSQ96QU6 501 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 PCDHB18PQ96TA0 734 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 PCYOX1Q9UHG3 505 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 PNMA2Q9UL42 364 aa27.55■■■□□ 2
COL13A1-203ENST00000398969 WNT10BO00744 389 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 RTN2O75298 545 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 COMTP21964 271 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 PEX5P50542 639 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 R3HDM1Q15032 1099 aaKnown RBP27.54■■■□□ 2
COL13A1-203ENST00000398969 SAMD1Q6SPF0 538 aaPredicted RBP27.54■■■□□ 2
COL13A1-203ENST00000398969 FAM83AQ86UY5 434 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 ZDHHC14Q8IZN3 488 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 KAT5Q92993 513 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 RNF25Q96BH1 459 aaPredicted RBP27.54■■■□□ 2
COL13A1-203ENST00000398969 SEC16BQ96JE7 1060 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 PKD2L1Q9P0L9 805 aa27.54■■■□□ 2
COL13A1-203ENST00000398969 PLCB4Q15147 1175 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 NBPF9Q3BBW0 867 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 DENND2CQ68D51 928 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 TTC27Q6P3X3 843 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 CDAN1Q8IWY9 1227 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 ZSWIM2Q8NEG5 633 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 PLEKHO2Q8TD55 490 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 TATDN2Q93075 761 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 CHORDC1Q9UHD1 332 aaPredicted RBP27.53■■■□□ 2
COL13A1-203ENST00000398969 SGPL1O95470 568 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 CHRNB2P17787 502 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 USP8P40818 1118 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 BYSLQ13895 437 aaKnown RBP27.53■■■□□ 2
COL13A1-203ENST00000398969 CCDC121Q6ZUS5 278 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 ARMC9Q7Z3E5 817 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 CCDC13Q8IYE1 715 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 XXYLT1Q8NBI6 393 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 MDM1Q8TC05 714 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 HSPBP1Q9NZL4 362 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 NOCTQ9UK39 431 aaKnown RBP27.53■■■□□ 2
COL13A1-203ENST00000398969 RPTORQ8N122 1335 aa27.53■■■□□ 2
COL13A1-203ENST00000398969 MTA2O94776 668 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 RPL21P46778 160 aaKnown RBP27.52■■■□□ 2
COL13A1-203ENST00000398969 CDR1P51861 262 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 MESDQ14696 234 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 ZYXQ15942 572 aaKnown RBP27.52■■■□□ 2
COL13A1-203ENST00000398969 EPS8L1Q8TE68 723 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 PGM2Q96G03 612 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 CABS1Q96KC9 395 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 MYOZ2Q9NPC6 264 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 ZHX2Q9Y6X8 837 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 TBC1D12O60347 775 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 PLA2G6O60733 806 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 GGPS1O95749 300 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 P4HBP07237 508 aaKnown RBP27.52■■■□□ 2
COL13A1-203ENST00000398969 PLS3P13797 630 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 NOP9Q86U38 636 aaKnown RBP27.52■■■□□ 2
COL13A1-203ENST00000398969 CENPTQ96BT3 561 aa27.52■■■□□ 2
COL13A1-203ENST00000398969 KCNH7Q9NS40 1196 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms