RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 HADHBP55084 474 aaKnown RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 ERVK-9P63128 1117 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CFAP58Q5T655 872 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 ANGEL2Q5VTE6 544 aaKnown RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 USP37Q86T82 979 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 PPM1KQ8N3J5 372 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 BSNDQ8WZ55 320 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 KAT5Q92993 513 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CCDC127Q96BQ5 260 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 TEX13BQ9BXU2 312 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CARD9Q9H257 536 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 ACAD9Q9H845 621 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CWC15Q9P013 229 aaKnown RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 COG5Q9UP83 839 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 PFASO15067 1338 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 TULP1O00294 542 aaPredicted RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 ATP2A1O14983 1001 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 DDX3YO15523 660 aaKnown RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 RPS6KA5O75582 802 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 STAM2O75886 525 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 NFASCO94856 1347 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 FGGP02679 453 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 FTLP02792 175 aaPredicted RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
PRAME-202ENST00000398743 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.023e-8■■■■□ 23.8
PRAME-202ENST00000398743 TRADDQ15628 312 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 PRAMEF18Q5VWM3 479 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 SWSAP1Q6NVH7 229 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 FAM71AQ8IYT1 594 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CCDC26Q8TAB7 109 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 EPS8L1Q8TE68 723 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 CYP39A1Q9NYL5 469 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 FAM170AA1A519 330 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 STBD1O95210 358 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 IVLP07476 585 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 ITGA4P13612 1032 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SOX10P56693 466 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 RTP1P59025 263 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 GPC5P78333 572 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 GNPTABQ3T906 1256 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 MAATS1Q7Z4T9 603 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 IQCKQ8N0W5 287 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 POMGNT1Q8WZA1 660 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 FBXL18Q96ME1 805 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 NAP1L3Q99457 506 aaPredicted RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 A1CFQ9NQ94 594 aaKnown RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 CTTNBP2NLQ9P2B4 639 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SEPT9Q9UHD8 586 aaPredicted RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 COQ4Q9Y3A0 265 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 RTN2O75298 545 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SGPL1O95470 568 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 GPC3P51654 580 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 PRKCEQ02156 737 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 TCEAL1Q15170 157 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 DCAF12L1Q5VU92 463 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 C11orf63Q6NUN7 778 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SLC39A4Q6P5W5 647 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 CATSPERGQ6ZRH7 1159 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 NOP9Q86U38 636 aaKnown RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 CCDC60Q8IWA6 550 aaPredicted RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 TMC2Q8TDI7 906 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SHC3Q92529 594 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.023e-8■■■■■ 50.7
PRAME-202ENST00000398743 TMOD4Q9NZQ9 345 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 AMACRQ9UHK6 382 aa14.94□□□□□ -0.02
PRAME-202ENST00000398743 NOCTQ9UK39 431 aaKnown RBP14.94□□□□□ -0.02
PRAME-202ENST00000398743 ADGRA3Q8IWK6 1321 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 BHMG1C9JSJ3 638 aaPredicted RBP14.93□□□□□ -0.02
PRAME-202ENST00000398743 HNRNPDLO14979 420 aaKnown RBP14.93□□□□□ -0.02
PRAME-202ENST00000398743 GZMAP12544 262 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 ECHS1P30084 290 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 GTF2H1P32780 548 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 ACTR2P61160 394 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 SP4Q02446 784 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 PRPF4BQ13523 1007 aaKnown RBP14.93□□□□□ -0.02
PRAME-202ENST00000398743 CLUL1Q15846 466 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 FBXL13Q8NEE6 735 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 KLRG1Q96E93 195 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 RNPC3Q96LT9 517 aaKnown RBP14.93□□□□□ -0.02
PRAME-202ENST00000398743 MFSD14AQ96MC6 490 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 POP1Q99575 1024 aaKnown RBP14.93□□□□□ -0.02
PRAME-202ENST00000398743 ATP6V0A4Q9HBG4 840 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 CYP26B1Q9NR63 512 aa14.93□□□□□ -0.02
PRAME-202ENST00000398743 MIF4GDA9UHW6 222 aaKnown RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 CYP26A1O43174 497 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 HSPA9P38646 679 aaKnown RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 CYP24A1Q07973 514 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 BRDTQ58F21 947 aaPredicted RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 ABHD15Q6UXT9 468 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 SLC47A2Q86VL8 602 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms