RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 CDH16O75309 829 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 PRLRP16471 622 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 ATL2Q8NHH9 583 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 MTMR8Q96EF0 704 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 GBP5Q96PP8 586 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 NUF2Q9BZD4 464 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 UVRAGQ9P2Y5 699 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 CYTH3O43739 400 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 RTN2O75298 545 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 DGAT1O75907 488 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 CALB1P05937 261 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 NR3C2P08235 984 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 YWHABP31946 246 aaKnown RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 DCTN4Q9UJW0 460 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 AFG3L2Q9Y4W6 797 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 FGFR4P22455 802 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ACOT2P49753 483 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 CCDC117Q8IWD4 279 aaPredicted RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SLC4A9Q96Q91 983 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 RIT2Q99578 217 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 RIOX1Q9H6W3 641 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SLC5A4Q9NY91 659 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SLC9A2Q9UBY0 812 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 FDX1P10109 184 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SNRNP35Q16560 246 aaKnown RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 KYNUQ16719 465 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 RUBCNQ92622 972 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SCYL1Q96KG9 808 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 TRIM55Q9BYV6 548 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SPC25Q9HBM1 224 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 FBXO40Q9UH90 709 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 H3BQF6 201 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 FOXN3O00409 490 aaPredicted RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 MED24O75448 989 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 COMTP21964 271 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 MRPS9P82933 396 aaKnown RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 NR1H3Q13133 447 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 Q3C1V9 767 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 AKAP3O75969 853 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 TBXAS1P24557 533 aaPredicted RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 MYO1EQ12965 1108 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 ZNF568Q3ZCX4 644 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 EPN3Q9H201 632 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 CPSF2Q9P2I0 782 aaKnown RBP13.25□□□□□ -0.29
SOCS6-201ENST00000397942 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 KNL1Q8NG31 2342 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 SLIT1O75093 1534 aa13.25□□□□□ -0.29
SOCS6-201ENST00000397942 PLS3P13797 630 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 CDK17Q00537 523 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 MSH4O15457 936 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 TMPRSS15P98073 1019 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 KIAA0895Q8NCT3 520 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 SCFD1Q8WVM8 642 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 AGPAT3Q9NRZ7 376 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 EPC2Q52LR7 807 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 PPM1NQ8N819 430 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 ISCUQ9H1K1 167 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 IQANK1A0A1B0GTG1 560 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 ABL1P00519 1130 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 KRT7P08729 469 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 CNGA1P29973 690 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 SERPINB6P35237 376 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 HERVK_113P62684 666 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 VPS72Q15906 364 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 TRIM72Q6ZMU5 477 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 OR6B3Q8NGW1 331 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 NOP53Q9NZM5 478 aaKnown RBP13.24□□□□□ -0.29
SOCS6-201ENST00000397942 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
SOCS6-201ENST00000397942 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms