RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 FLAD1Q8NFF5 587 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 EIF2AK1Q9BQI3 630 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 THAP2Q9H0W7 228 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 SNX24Q9Y343 169 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 DAAM1Q9Y4D1 1078 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 GTPBP10A4D1E9 387 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 FAM13AO94988 1023 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 TMEM253P0C7T8 217 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CYP2J2P51589 502 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 PPATQ06203 517 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 PLS1Q14651 629 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 Q4G0T1 1027 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 APOBEC3HQ6NTF7 200 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CDC42EP5Q6NZY7 148 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 MOXD1Q6UVY6 613 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 KLHL23Q8NBE8 558 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 EZH1Q92800 747 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 SELENOSQ9BQE4 189 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 ERP44Q9BS26 406 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 DPPA5A6NC42 116 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 ZBTB39O15060 712 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 LRRN2O75325 713 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 RARAP10276 462 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 KRT13P13646 458 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 FMO5P49326 533 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CACNB3P54284 484 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CBWD6Q4V339 395 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CBWD3Q5JTY5 395 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CBWD5Q5RIA9 395 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 RINT1Q6NUQ1 792 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 STK33Q9BYT3 514 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 EPB41L4BQ9H329 900 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 VAV3Q9UKW4 847 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 BCS1LQ9Y276 419 aa17.18■□□□□ 0.34
CHMP1A-201ENST00000397901 CHMP2AO43633 222 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 NPTXRO95502 500 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 MMEP08473 750 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 ZNF76P36508 570 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 TCP10Q12799 353 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 DUPD1Q68J44 220 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 UHMK1Q8TAS1 419 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 ALG3Q92685 438 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 PRCCQ92733 491 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 PLCD4Q9BRC7 762 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 NSRP1Q9H0G5 558 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 ZDHHC18Q9NUE0 388 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 COG5Q9UP83 839 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-201ENST00000397901 TMEM110-MUSTN1A8MSY1 372 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.349e-11■■□□□ 12.9
CHMP1A-201ENST00000397901 TBX3O15119 743 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 EYA4O95677 639 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 CNGA1P29973 690 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 LACTBP83111 547 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 MXRA7P84157 204 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 ATP11AP98196 1134 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 JAMLQ86YT9 394 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 TPH2Q8IWU9 490 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 ELAC2Q9BQ52 826 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 CHN1P15882 459 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 PMS2P54278 862 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 MRPS35P82673 323 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 UBAP2Q5T6F2 1119 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 LRRC34Q8IZ02 419 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 FBXO25Q8TCJ0 367 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 TEKT1Q969V4 418 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 C18orf8Q96DM3 657 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 IFT74Q96LB3 600 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 INTS2Q9H0H0 1204 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 CARD9Q9H257 536 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 ABCF3Q9NUQ8 709 aa17.16■□□□□ 0.34
CHMP1A-201ENST00000397901 UBOX5O94941 541 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 VIMP08670 466 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 SREBF1P36956 1147 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 DENND2CQ68D51 928 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 GBP7Q8N8V2 638 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 NEK9Q8TD19 979 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 TEKT4Q8WW24 435 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 RNF25Q96BH1 459 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 FAM20AQ96MK3 541 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 KCNQ5Q9NR82 932 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
CHMP1A-201ENST00000397901 CHORDC1Q9UHD1 332 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms