RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM40Q8WWA1 233 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 ACO2Q99798 780 aaKnown RBP23.15■■□□□ 1.3
CPNE1-204ENST00000397443 HAPLN2Q9GZV7 340 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 PRMT7Q9NVM4 692 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-204ENST00000397443 INTS13Q9NVM9 706 aa23.15■■□□□ 1.3
CPNE1-204ENST00000397443 TEX33O43247 280 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 ERLIN2O94905 339 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 GNA14O95837 355 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 ATN1P54259 1190 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-204ENST00000397443 MRPS6P82932 125 aaKnown RBP23.14■■□□□ 1.3
CPNE1-204ENST00000397443 CDC42EP1Q00587 391 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 NFIL3Q16649 462 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 SLC9A9Q8IVB4 645 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 NME8Q8N427 588 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 KCNN1Q92952 543 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 ARMCX3Q9UH62 379 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-204ENST00000397443 CDY2AQ9Y6F7 541 aa23.14■■□□□ 1.3
CPNE1-204ENST00000397443 M0QZ92 97 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 ARVCFO00192 962 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 CBFA2T2O43439 604 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 B4GALT4O60513 344 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 PIGRP01833 764 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 SNRPFP62306 86 aaKnown RBP23.14■■□□□ 1.29
CPNE1-204ENST00000397443 FILIP1LQ4L180 1135 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 SEZ6Q53EL9 994 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 DCAF17Q5H9S7 520 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-204ENST00000397443 ATF7IP2Q5U623 682 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 TCERG1LQ5VWI1 586 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 SRGAP1Q7Z6B7 1085 aa23.14■■□□□ 1.29
CPNE1-204ENST00000397443 IFNLR1Q8IU57 520 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-204ENST00000397443 A0A1B0GTH6 734 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 SLC16A3O15427 465 aaKnown RBP23.13■■□□□ 1.29
CPNE1-204ENST00000397443 CLDN3O15551 220 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 TPM2P07951 284 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 DARSP14868 501 aaKnown RBP23.13■■□□□ 1.29
CPNE1-204ENST00000397443 SNX17Q15036 470 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 AMHR2Q16671 573 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 ZPBP2Q6X784 338 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 CATSPER4Q7RTX7 472 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 CBWD2Q8IUF1 395 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 C12orf56Q8IXR9 622 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 FAM213AQ9BRX8 229 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 MSTO1Q9BUK6 570 aa23.13■■□□□ 1.29
CPNE1-204ENST00000397443 EIF4BP23588 611 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 PTPN11Q06124 597 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 EEF1DP3Q658K8 133 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 DIS3LQ8TF46 1054 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 DHX38Q92620 1227 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 CELF4Q9BZC1 486 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 AGO2Q9UKV8 859 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 LRRC10BA6NIK2 292 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 TOM1L1O75674 476 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 TPM3P06753 285 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 ARF4P18085 180 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 GARTP22102 1010 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 ACOT2P49753 483 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 CRYBB1P53674 252 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 UBXN1Q04323 297 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 ZNF568Q3ZCX4 644 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 MIIPQ5JXC2 388 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 SLFN12LQ6IEE8 588 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 SLC43A3Q8NBI5 491 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 MRFAP1L1Q96HT8 127 aa23.12■■□□□ 1.29
CPNE1-204ENST00000397443 RTN4Q9NQC3 1192 aaKnown RBP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.12■■□□□ 1.29
CPNE1-204ENST00000397443 TSPAN1O60635 241 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 ADRB2P07550 413 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 PTK7Q13308 1070 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 MYBPC2Q14324 1141 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 NR1I3Q14994 352 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 SNRNP35Q16560 246 aaKnown RBP23.11■■□□□ 1.29
CPNE1-204ENST00000397443 MAN2A1Q16706 1144 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 ZBTB41Q5SVQ8 909 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 FRMD5Q7Z6J6 570 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 TRIM59Q8IWR1 403 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 GPD1LQ8N335 351 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 MMRN2Q9H8L6 949 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 TRPV2Q9Y5S1 764 aa23.11■■□□□ 1.29
CPNE1-204ENST00000397443 CNTNAP2Q9UHC6 1331 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 CHRNA1P02708 482 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 FAM187BQ17R55 369 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 VWA3BQ502W6 1294 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 TSHZ1Q6ZSZ6 1077 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 STYXL1Q9Y6J8 313 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 A0A0B4J269 797 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 PQBP1O60828 265 aaKnown RBP23.1■■□□□ 1.29
CPNE1-204ENST00000397443 MNX1P50219 401 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-204ENST00000397443 MARSP56192 900 aaKnown RBP23.1■■□□□ 1.29
CPNE1-204ENST00000397443 OSTNP61366 133 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 CCDC155Q8N6L0 562 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 PRIMPOLQ96LW4 560 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 MKNK1Q9BUB5 465 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 MCOLN1Q9GZU1 580 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 NDST4Q9H3R1 872 aa23.1■■□□□ 1.29
CPNE1-204ENST00000397443 METTL14Q9HCE5 456 aaKnown RBP23.1■■□□□ 1.29
CPNE1-204ENST00000397443 MKI67P46013 3256 aaKnown RBP23.09■■□□□ 1.29
CPNE1-204ENST00000397443 LGALS16A8MUM7 142 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 TRIM49P0CI25 452 aa23.09■■□□□ 1.29
CPNE1-204ENST00000397443 TRIM49CP0CI26 452 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms